1. Gene
  2. COL13A1 - collagen type XIII alpha 1 chain Gene

COL13A1 - collagen type XIII alpha 1 chain Gene

中文名称:XIII 型胶原蛋白 alpha 1 链

种属: Homo sapiens

同用名: CMS19; COLXIIIA1

基因 ID: 1305 | 基因类型: protein coding

关于 COL13A1

Cytogenetic location: 10q22.1 Genomic coordinates (GRCh38): 10:69,801,906-69,959,144 (from NCBI)

This gene has 51 transcripts (splice variants), 137 orthologues, 37 paralogues and is associated with 4 phenotypes. Broad expression in prostate (RPKM 4.3), lung (RPKM 4.0) and 19 other tissues.

功能概要

该基因编码一种非原纤维胶原蛋白的α链。该基因产物的功能尚不清楚,但已在所有结缔组织生成细胞中以低水平检测到它,因此它可能在结缔组织中发挥一般功能。与分泌到细胞外基质中的大多数胶原蛋白不同,胶原蛋白 XIII 包含跨膜结构域,并且该蛋白质已定位于质膜。该基因的转录本经历复杂而广泛的剪接,涉及至少八个外显子。与其他胶原蛋白一样,胶原蛋白 XIII 是三聚体;目前尚不清楚该三聚体是否由一种或多种 α 链异构体组成。已经描述了许多选择性剪接的转录本变体,但其中一些的全长性质尚未确定。[RefSeq 提供,2008 年 7 月]

This gene encodes the alpha chain of one of the nonfibrillar collagens. The function of this gene product is not known, however, it has been detected at low levels in all connective tissue-producing cells so it may serve a general function in connective tissues. Unlike most of the collagens, which are secreted into the extracellular matrix, collagen XIII contains a transmembrane domain and the protein has been localized to the plasma membrane. The transcripts for this gene undergo complex and extensive splicing involving at least eight exons. Like other collagens, collagen XIII is a trimer; it is not known whether this trimer is composed of one or more than one alpha chain isomer. A number of alternatively spliced transcript variants have been described, but the full length nature of some of them has not been determined. [provided by RefSeq, Jul 2008]

COL13A1 基因产物(16)

mRNA Protein Name
NM_001130103.2 NP_001123575.1 collagen alpha-1(XIII) chain isoform 1
NM_001320951.2 NP_001307880.1 collagen alpha-1(XIII) chain isoform 22
NM_001368882.1 NP_001355811.1 collagen alpha-1(XIII) chain isoform 23
NM_001368883.1 NP_001355812.1 collagen alpha-1(XIII) chain isoform 24
NM_001368884.1 NP_001355813.1 collagen alpha-1(XIII) chain isoform 25
NM_001368885.1 NP_001355814.1 collagen alpha-1(XIII) chain isoform 26
NM_001368886.1 NP_001355815.1 collagen alpha-1(XIII) chain isoform 27
NM_001368895.1 NP_001355824.1 collagen alpha-1(XIII) chain isoform 28
NM_001368896.1 NP_001355825.1 collagen alpha-1(XIII) chain isoform 29
NM_001368897.1 NP_001355826.1 collagen alpha-1(XIII) chain isoform 30
NM_001368898.1 NP_001355827.1 collagen alpha-1(XIII) chain isoform 31
NM_080798.4 NP_542988.3 collagen alpha-1(XIII) chain isoform 21
NM_080800.4 NP_542990.3 collagen alpha-1(XIII) chain isoform 11
NM_080801.4 NP_542991.3 collagen alpha-1(XIII) chain isoform 5
NM_080802.4 NP_542992.3 collagen alpha-1(XIII) chain isoform 15
NM_080805.4 NP_542995.3 collagen alpha-1(XIII) chain isoform 19

COL13A1 蛋白结构

Collagen

Collagen: Collagen triple helix repeat (20 copies) (157 - 214)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (269 - 321)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (285 - 336)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (318 - 378)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (382 - 440)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (464 - 522)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (506 - 564)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (568 - 623)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (619 - 673)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (643 - 699)

  • 0
  • 200
  • 400
  • 600
  • 717 a.a.
蛋白主名 其他名称

collagen alpha-1(XIII) chain

collagen, type XIII, alpha 1

关联疾病

疾病名称 别名
Myasthenic Syndrome, Congenital, 19

Congenital Myasthenic Syndrome 19

CMS19

Myasthenic Syndrome, Congenital, Type 19

Presynaptic Congenital Myasthenic Syndromes

Presynaptic Congenital Myasthenic Syndrome

Congenital Myasthenic Syndromes, Presynaptic

Postsynaptic Congenital Myasthenic Syndromes

Congenital Myasthenic Syndromes, Postsynaptic

Congenital Myasthenic Syndrome

Congenital Myasthenia

Congenital Myasthenic Syndromes

Cms

Myasthenic Syndromes, Congenital

Myasthenic Syndromes Congenital

Myasthenic Syndrome, Congenital

Congenital Myasthenic Syndrome Ib

Congenital And Developmental Myasthenia

Developmental Myasthenia

Dystonia 27

DYT27

Primary Dystonia, Dyt27 Type

Dystonia, Type 27

Deafness, X-Linked 6

DFNX6

X-Linked Deafness 6

Deafness, X-Linked, 6

Deafness, X-Linked, Type 6

Ptosis

Blepharoptosis

Drooping Eyelid

Droopy Eyelid

Ptosis Of Eyelid

Paralysis Of Levator Palpebrae Superioris

Neuromuscular Junction Disease

Neuromuscular Junction Diseases

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Rattus norvegicus COL13A1 RGD RGD:1595704
Macaca mulatta COL13A1 VGNC VGNC:84881
Canis familiaris COL13A1 VGNC VGNC:39459
Mus musculus COL13A1 MGD MGI:1277201
Bos taurus COL13A1 VGNC VGNC:27555