1. Gene
  2. GEMIN5 - gem nuclear organelle associated protein 5 Gene

GEMIN5 - gem nuclear organelle associated protein 5 Gene

中文名称:宝石核细胞器相关蛋白 5

种属: Homo sapiens

同用名: NEDCAM; GEMIN-5

基因 ID: 25929 | 基因类型: protein coding

关于 GEMIN5

Cytogenetic location: 5q33.2 Genomic coordinates (GRCh38): 5:154,887,411-154,938,211 (from NCBI)

This gene has 3 transcripts (splice variants), 204 orthologues, 9 paralogues and is associated with 2 phenotypes. Ubiquitous expression in testis (RPKM 4.9), ovary (RPKM 4.6) and 25 other tissues.

功能概要

该基因编码一种 WD 重复蛋白,它是运动神经元 (SMN) 复合体存活的一个组成部分。 SMN 复合体通过拼接体小核核糖核蛋白 (snRNP) 的组装在 mRNA 剪接中发挥关键作用,并且还可能介导其他类别核糖核蛋白的组装和运输。编码的蛋白质是 SMN 复合体的 snRNA 结合成分。该基因的失调可能在选择性 mRNA 剪接和肿瘤细胞运动中发挥作用。已经观察到该基因编码多种亚型的可变剪接转录物变体。[RefSeq 提供,2011 年 11 月]

This gene encodes a WD repeat protein that is a component of the survival of motor neurons (SMN) complex. The SMN complex plays a critical role in mRNA splicing through the assembly of spliceosomal small nuclear ribonucleoproteins (snRNPs), and may also mediate the assembly and transport of other classes of ribonucleoproteins. The encoded protein is the snRNA-binding component of the SMN complex. Dysregulation of this gene may play a role in alternative mRNA splicing and tumor cell motility. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Nov 2011]

GEMIN5 基因产物(2)

mRNA Protein Name
NM_001252156.2 NP_001239085.1 gem-associated protein 5 isoform 2
NM_015465.5 NP_056280.2 gem-associated protein 5 isoform 1
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables RNA 7-methylguanosine cap binding IDA
IDA: 通过直接分析推断
19750007 GOA
enables U1 snRNA binding IDA
IDA: 通过直接分析推断
19377484 GOA
enables U4 snRNA binding IDA
IDA: 通过直接分析推断
19377484 GOA
enables U4atac snRNA binding IDA
IDA: 通过直接分析推断
20513430 GOA
enables mRNA 3'-UTR binding IDA
IDA: 通过直接分析推断
25911097 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
11714716 GOA
enables ribosome binding IDA
IDA: 通过直接分析推断
27507887 GOA
enables snRNA binding IDA
IDA: 通过直接分析推断
16857593 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in regulation of translation IMP
IMP: 通过突变表型推断
25911097 GOA
involved in spliceosomal snRNP assembly EXP
EXP: 通过实验结果推断
12067652 GOA
involved in spliceosomal snRNP assembly IDA
IDA: 通过直接分析推断
18984161 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of SMN complex IDA
IDA: 通过直接分析推断
17178713 GOA
part of SMN complex IPI
IPI: 通过物理相互作用推断
17178713 GOA
part of SMN-Gemin2 complex IDA
IDA: 通过直接分析推断
19377484 GOA
part of SMN-Sm protein complex IDA
IDA: 通过直接分析推断
18984161 GOA
located in cytoplasm IDA
IDA: 通过直接分析推断
11714716 GOA
located in cytosol IDA
IDA: 通过直接分析推断
18984161 GOA
located in nuclear body IDA
IDA: 通过直接分析推断
11714716 GOA
located in nucleoplasm IDA
IDA: 通过直接分析推断
11714716 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

GEMIN5 蛋白结构

WD40

WD40: WD domain, G-beta repeat (57 - 95)

WD40

WD40: WD domain, G-beta repeat (185 - 255)

WD40

WD40: WD domain, G-beta repeat (630 - 668)

WD40

WD40: WD domain, G-beta repeat (673 - 710)

  • 0
  • 300
  • 600
  • 900
  • 1200
  • 1508 a.a.
蛋白主名 其他名称

gem-associated protein 5

GEMIN5 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra GEMIN5 Q8TEQ6 SNRPE Homo sapiens P62304
Pull Down
11714716
Intra GEMIN5 Q8TEQ6 SMN1 Homo sapiens Q16637
Pull Down
11714716
Intra GEMIN5 Q8TEQ6 SMN1 Homo sapiens Q16637
Anti Bait CoIP
11714716
Intra GEMIN5 Q8TEQ6 SMN1 Homo sapiens Q16637
Anti Tag CoIP
11714716
Intra GEMIN5 Q8TEQ6 EIF4E Homo sapiens P06730
Pull Down
16739988
Intra GEMIN5 Q8TEQ6 EIF4E Homo sapiens P06730
IF
16739988
Intra GEMIN5 Q8TEQ6 EIF4E Homo sapiens P06730
Affinity Chrom
16739988
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Neurodevelopmental Disorder With Cerebellar Atrophy And Motor Dysfunction

NEDCAM

Muscular Atrophy

Muscle Wasting

Amyotrophia

Wasting - Muscle

Skeletal Muscle Atrophy

Childhood Spinal Muscular Atrophy

Spinal Muscular Atrophies Of Childhood

Survival Motor Neuron Spinal Muscular Atrophy

Spinal Muscular Atrophy, Type Ii

SMA2

Sma Ii

Muscular Atrophy, Spinal, Intermediate Type

Muscular Atrophy, Spinal, Infantile Chronic Form

Intermediate Spinal Muscular Atrophy

Spinal Muscular Atrophy Type Ii

Spinal Muscular Atrophy-2

Spinal Muscular Atrophy 2

Spinal Muscular Atrophy Type 2

Dubowitz Disease

Proximal Spinal Muscular Atrophy Type 2

Sma Type 2

Sma Type Ii

Sma-Ii

Spinal Muscular Atrophy Infantile Chronic Form

Spinal Muscular Atrophy Intermediate Type

Spinal Muscular Atrophies Of Childhood

Atrophy, Muscular, Spinal, Type Ii

Muscular Atrophy, Spinal, Type Ii

Pontocerebellar Hypoplasia, Type 1e

Pontocerebellar Hypoplasia Type 1

PCH1E

Norman Disease

Pch1

Pontocerebellar Hypoplasia With Anterior Horn Cell Disease

Pontocerebellar Hypoplasia With Infantile Spinal Muscular Atrophy

Pontocerebellar Hypoplasia Type 1e

Pontocerebellar Hypoplasia 1e

Doid:0112322

Doid:0112330

Spinal Muscular Atrophy, Type Iii

SMA3

Juvenile Spinal Muscular Atrophy

Kugelberg-Welander Disease

Sma Iii

Kugelberg-Welander Syndrome

Kws

Muscular Atrophy, Juvenile

Spinal Muscular Atrophy, Mild Childhood And Adolescent Form

Spinal Muscular Atrophy-3

Spinal Muscular Atrophy Type 3

Spinal Muscular Atrophy, Type Iii, Modifier Of

Type Iii Spinal Muscular Atrophy

Sma 3

Proximal Spinal Muscular Atrophy Type 3

Sma Type 3

Sma Type Iii

Sma-Iii

Spinal Muscular Atrophy 3

Spinal Muscular Atrophy Mild Childhood And Adolescent Form

Spinal Muscular Atrophy Type Iii

Wohlfart-Kugelberg-Welander Disease

Atrophy, Muscular, Spinal, Type Iii

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Bos taurus GEMIN5 VGNC VGNC:29318
Mus musculus GEMIN5 MGD MGI:2449311
Rattus norvegicus GEMIN5 RGD RGD:1586275
Macaca mulatta GEMIN5 VGNC VGNC:72751
Canis familiaris GEMIN5 VGNC VGNC:41175
Felis catus GEMIN5 VGNC VGNC:62515