1. Gene
  2. PCBP2 - poly(rC) binding protein 2 Gene

PCBP2 - poly(rC) binding protein 2 Gene

中文名称:聚 (rC) 结合蛋白 2

种属: Homo sapiens

同用名: HNRPE2; HNRNPE2; hnRNP-E2

基因 ID: 5094 | 基因类型: protein coding

关于 PCBP2

Cytogenetic location: 12q13.13 Genomic coordinates (GRCh38): 12:53,452,102-53,481,162 (from NCBI)

This gene has 26 transcripts (splice variants), 280 orthologues, 12 paralogues and is associated with 1 phenotype. Ubiquitous expression in kidney (RPKM 155.8), thyroid (RPKM 127.6) and 25 other tissues.

功能概要

该基因编码的蛋白质似乎是多功能的。与 PCBP-1 和 hnRNPK 一起,它是主要的细胞聚 (rC) 结合蛋白之一。编码的蛋白质包含三个可能参与 RNA 结合的 K 同源 (KH) 结构域。与 PCBP-1 一起,该蛋白还通过与 IRES 的茎环 IV 的序列特异性相互作用作为脊髓灰质炎病毒 RNA 的翻译共激活因子,通过与其 5'-末端三叶草结构结合促进脊髓灰质炎病毒 RNA 复制。它还涉及 15-脂氧合酶 mRNA、人乳头瘤病毒 16 型 L2 mRNA 和甲型肝炎病毒 RNA 的翻译控制。还建议编码的蛋白质在序列特异性 α-珠蛋白 mRNP 复合物的形成中发挥作用,该复合物与 α-珠蛋白 mRNA 稳定性相关。这种多外显子结构 mRNA 被认为是逆转录生成 PCBP-1,一种功能类似于 PCBP2 的无内含子基因。该基因和 PCBP-1 具有旁系同源基因 (PCBP3 和 PCBP4) ,这些基因被认为是整个基因复制事件的结果。该基因还有两个加工过的假基因 (PCBP2P1 和 PCBP2P2) 。已发现该基因编码不同异构体的多个转录变体。[RefSeq 提供,2018 年 1 月]

The protein encoded by this gene appears to be multifunctional. Along with PCBP-1 and hnRNPK, it is one of the major cellular poly(rC)-binding proteins. The encoded protein contains three K-homologous (KH) domains which may be involved in RNA binding. Together with PCBP-1, this protein also functions as a translational coactivator of poliovirus RNA via a sequence-specific interaction with stem-loop IV of the IRES, promoting poliovirus RNA replication by binding to its 5'-terminal cloverleaf structure. It has also been implicated in translational control of the 15-lipoxygenase mRNA, human papillomavirus type 16 L2 mRNA, and hepatitis A virus RNA. The encoded protein is also suggested to play a part in formation of a sequence-specific alpha-globin mRNP complex which is associated with alpha-globin mRNA stability. This multiexon structural mRNA is thought to be retrotransposed to generate PCBP-1, an intronless gene with functions similar to that of PCBP2. This gene and PCBP-1 have paralogous genes (PCBP3 and PCBP4) which are thought to have arisen as a result of duplication events of entire genes. This gene also has two processed pseudogenes (PCBP2P1 and PCBP2P2). Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jan 2018]

PCBP2 基因产物(7)

mRNA Protein Name
NM_001098620.3 NP_001092090.1 poly(rC)-binding protein 2 isoform c
NM_001128911.2 NP_001122383.1 poly(rC)-binding protein 2 isoform d
NM_001128912.2 NP_001122384.1 poly(rC)-binding protein 2 isoform e
NM_001128913.2 NP_001122385.1 poly(rC)-binding protein 2 isoform f
NM_001128914.2 NP_001122386.1 poly(rC)-binding protein 2 isoform g
NM_005016.6 NP_005007.2 poly(rC)-binding protein 2 isoform a
NM_031989.5 NP_114366.1 poly(rC)-binding protein 2 isoform b
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables RNA binding IDA
IDA: 通过直接分析推断
7607214 GOA
enables enzyme binding IPI
IPI: 通过物理相互作用推断
19881509 GOA
enables lncRNA binding IDA
IDA: 通过直接分析推断
31361039 GOA
enables promoter-enhancer loop anchoring activity IMP
IMP: 通过突变表型推断
31361039 GOA
enables protein binding IDA
IDA: 通过直接分析推断
35322803 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
16713569 GOA
enables ubiquitin protein ligase binding IPI
IPI: 通过物理相互作用推断
19881509 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in IRES-dependent viral translational initiation IDA
IDA: 通过直接分析推断
12414943 GOA
involved in chromatin looping IMP
IMP: 通过突变表型推断
31361039 GOA
involved in negative regulation of cGAS/STING signaling pathway IDA
IDA: 通过直接分析推断
35322803 GOA
involved in negative regulation of defense response to virus IMP
IMP: 通过突变表型推断
19881509 GOA
involved in proteasome-mediated ubiquitin-dependent protein catabolic process IMP
IMP: 通过突变表型推断
19881509 GOA
involved in viral RNA genome replication IDA
IDA: 通过直接分析推断
12414943 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in cytoplasm IDA
IDA: 通过直接分析推断
19029303 GOA
is active in nucleus IDA
IDA: 通过直接分析推断
31361039 GOA
located in nucleus IDA
IDA: 通过直接分析推断
22720776 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

PCBP2 蛋白结构

KH_1

KH_1: KH domain (15 - 75)

KH_1

KH_1: KH domain (99 - 162)

KH_1

KH_1: KH domain (291 - 351)

  • 0
  • 100
  • 200
  • 300
  • 365 a.a.
蛋白主名 其他名称

poly(rC)-binding protein 2

alpha-CP2

PCBP2 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra PCBP2 Q15366 SRSF3 Homo sapiens P84103
Anti Bait CoIP
17183366
Intra PCBP2 Q15366 SRSF3 Homo sapiens P84103
Y2H
17183366
Intra PCBP2 Q15366 SNRPA Homo sapiens P09012
Validated Y2H
25416956
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Rabies

Lyssa

Hydrophobia

St Hubert Disease

Frontotemporal Dementia

Pallidopontonigral Degeneration

Frontotemporal Lobar Degeneration

Semantic Dementia

FTD

Frontotemporal Lobe Dementia

Multiple System Tauopathy With Presenile Dementia

Dementia, Frontotemporal

Frontotemporal Dementia With Parkinsonism

Mstd

Frontotemporal Lobar Degeneration With Tau Inclusions

Ftld With Tau Inclusions

Dementia, Frontotemporal, With Parkinsonism

Fldem

Ftdp17

Disinhibition-Dementia-Parkinsonism-Amyotrophy Complex

Ddpac

Wilhelmsen-Lynch Disease

Wld

Ppnd

Dementia, Frontotemporal, With Or Without Parkinsonism

Semantic Primary Progressive Aphasia

Semantic Variant Ppa

Wilhemsen-Lynch Disease

Frontotemporal Dementia-Amyotrophic Lateral Sclerosis

Frontotemporal Dementia And Parkinsonism Linked To Chromosome 17

Ftd-Als

Ftld

Pick Complex

Pick Disease Of The Brain

Frontotemporal Dementia With Parkinsonism-17

Grn-Related Frontotemporal Dementia

Frontotemporal Dementia With Motor Neuron Disease

Dementia In Fronto-Temporal Lobar Degeneration

Ftd - [Frontotemporal Dementia]

Temple Dementia

Frontal Lobe Dementia

Leukemia, Chronic Myeloid

Chronic Myeloid Leukemia

Chronic Myelogenous Leukemia

CML

Chronic Granulocytic Leukemia

Leukemia, Philadelphia Chromosome-Positive, Resistant To Imatinib

Chronic Myeloid Leukaemia

Chronic Granulocytic Leukaemia

Chronic Myelogenous Leukaemia

Myeloid Leukemia, Chronic

Leukemia, Chronic Myelogenous

Leukemia, Chronic Myeloid, Philadelphia Chromosome Positive, Somatic

Cml - Chronic Myelogenous Leukemia

Cgl

Chronic Myelocytic Leukemia

Leukemia, Chronic Myeloid, Atypical

ACML

Atypical Chronic Myeloid Leukemia Bcr-Abl1 Negative

Myeloid Leukemia Chronic

Leukemia, Myeloid, Chronic

Leukemia, Myeloid, Chronic, Atypical, Bcr-Abl Negative

Cml- [Chronic Myeloid Leukaemia]

Cgl - [Chronic Granulocytic Leukaemia]

Chronic Myelocytic Leukaemia

Deficiency Anemia

Anemia

Deficiency Anemias

Anaemia

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Bos taurus PCBP2 VGNC VGNC:49069
Rattus norvegicus PCBP2 RGD RGD:1309626
Mus musculus PCBP2 MGD MGI:108202