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  2. POLR2E - RNA polymerase II, I and III subunit E Gene

POLR2E - RNA polymerase II, I and III subunit E Gene

中文名称:RNA 聚合酶 II、I 和 III 亚基 E

种属: Homo sapiens

同用名: RPB5; XAP4; RPABC1; hRPB25; hsRPB5

基因 ID: 5434 | 基因类型: protein coding

关于 POLR2E

Cytogenetic location: 19p13.3 Genomic coordinates (GRCh38): 19:1,086,574-1,095,375 (from NCBI)

This gene has 14 transcripts (splice variants) and 211 orthologues. Ubiquitous expression in fat (RPKM 46.7), kidney (RPKM 21.6) and 25 other tissues.

功能概要

该基因编码 RNA 聚合酶 II 的第五大亚基,该聚合酶负责在真核生物中合成信使 RNA。该亚基由其他两种 DNA 指导的 RNA 聚合酶共享,并且以超过其他聚合酶亚基两倍的摩尔浓度存在。该亚基与肝炎病毒反式激活蛋白之间的相互作用已得到证实,表明转录激活因子与聚合酶之间的相互作用可通过该亚基发生。一个假基因位于 11 号染色体上。已发现该基因的三个转录本变体编码两个不同的亚型。[RefSeq 提供,2015 年 10 月]

This gene encodes the fifth largest subunit of RNA polymerase II, the polymerase responsible for synthesizing messenger RNA in eukaryotes. This subunit is shared by the Other two DNA-directed RNA polymerases and is present in two-fold molar excess over the Other polymerase subunits. An interaction between this subunit and a hepatitis virus transactivating protein has been demonstrated, suggesting that interaction between transcriptional activators and the polymerase can occur through this subunit. A pseudogene is located on chromosome 11. Three transcript variants encoding two different isoforms have been found for this gene. [provided by RefSeq, Oct 2015]

POLR2E 基因产物(3)

mRNA Protein Name
NM_001316323.2 NP_001303252.1 DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform b
NM_001316324.2 NP_001303253.1 DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform b
NM_002695.5 NP_002686.3 DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform a
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
12737519 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in transcription by RNA polymerase II IDA
IDA: 通过直接分析推断
9852112 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of RNA polymerase I complex IDA
IDA: 通过直接分析推断
34671025 GOA
part of RNA polymerase II, core complex IDA
IDA: 通过直接分析推断
9852112 GOA
part of RNA polymerase III complex IDA
IDA: 通过直接分析推断
33335104 GOA
part of RPAP3/R2TP/prefoldin-like complex IPI
IPI: 通过物理相互作用推断
31738558 GOA
located in nucleus IDA
IDA: 通过直接分析推断
9852112 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

POLR2E 蛋白结构

RNA_pol_Rpb5_N

RNA_pol_Rpb5_N: RNA polymerase Rpb5, N-terminal domain (1 - 95)

RNA_pol_Rpb5_C

RNA_pol_Rpb5_C: RNA polymerase Rpb5, C-terminal domain (137 - 209)

  • 0
  • 100
  • 210 a.a.
蛋白主名 其他名称

DNA-directed RNA polymerases I, II, and III subunit RPABC1

DNA directed RNA polymerase II 23 kda polypeptide

POLR2E 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
POLR2E P19388 GTF3C3 Homo sapiens Q9Y5Q9 32814053
种属内
POLR2E P19388 GTF3C3 Homo sapiens Q9Y5Q9 32814053
种属内
POLR2E P19388 GTF3C3 Homo sapiens Q9Y5Q9 32814053
种属内
POLR2E P19388 IP6K3 Homo sapiens Q96PC2 32296183
种属内
POLR2E P19388 IP6K3 Homo sapiens Q96PC2 32296183
种属内
POLR2E P19388 IP6K3 Homo sapiens Q96PC2 32296183
种属内
POLR2E P19388 ATN1 Homo sapiens Q86V38 32814053
种属内
POLR2E P19388 ATN1 Homo sapiens Q86V38 32814053
种属内
POLR2E P19388 ATN1 Homo sapiens Q86V38 32814053
种属内
POLR2E P19388 KLK6 Homo sapiens Q92876 32814053
种属内
POLR2E P19388 KLK6 Homo sapiens Q92876 32814053
种属内
POLR2E P19388 KLK6 Homo sapiens Q92876 32814053
种属内
POLR2E P19388 F13A1 Homo sapiens P00488 32814053
种属内
POLR2E P19388 F13A1 Homo sapiens P00488 32814053
种属内
POLR2E P19388 F13A1 Homo sapiens P00488 32814053
种属内
POLR2E P19388 q9y649_human Homo sapiens Q9Y649 32814053
种属内
POLR2E P19388 q9y649_human Homo sapiens Q9Y649 32814053
种属内
POLR2E P19388 q9y649_human Homo sapiens Q9Y649 32814053
种属内
POLR2E P19388 FGFR3 Homo sapiens P22607 32814053
种属内
POLR2E P19388 FGFR3 Homo sapiens P22607 32814053
种属内
POLR2E P19388 FGFR3 Homo sapiens P22607 32814053
种属内
POLR2E P19388 URI1 Homo sapiens O94763 33961781
种属内
POLR2E P19388 URI1 Homo sapiens O94763 12737519
种属内
POLR2E P19388 URI1 Homo sapiens O94763
TAP
24981860
种属内
POLR2E P19388 URI1 Homo sapiens O94763 35271311
种属内
POLR2E P19388 GTF2B Homo sapiens Q00403 27193682
种属内
POLR2E P19388 GTF2B Homo sapiens Q00403 35271311
种属内
POLR2E P19388 UBE2D4 Homo sapiens Q9Y2X8 32296183
种属内
POLR2E P19388 DR1 Homo sapiens Q01658 32814053
种属内
POLR2E P19388 DR1 Homo sapiens Q01658 32814053
种属内
POLR2E P19388 DR1 Homo sapiens Q01658 32814053
种属间: 跨种属相互作用 种属内: 同种属相互作用

POLR2E 抗体

目录号 产品名 应用 反应物种
HY-P81939 RNA Polymerases I/II/III Subunit ABC1 Antibody (YA1684) WB, IHC-P Human, Mouse, Rat

关联疾病

疾病名称 别名
Esophageal Cancer

Esophageal Carcinoma

Carcinoma Of Esophagus

Esophageal Squamous Cell Carcinoma, Somatic

Esophageal Carcinoma, Somatic

Esophagus Cancer

Gastric Cardia Adenocarcinoma

Esophageal Neoplasms

Esophageal Cancer, Somatic

Cancer Of Esophagus

Cancer Of Oesophagus

Carcinoma Of Oesophagus

Ca Lower Third Oesophagus

Ca Middle Third Oesophagus

Malignant Neoplasm Of Distal Third Of Esophagus

Malignant Neoplasm Of Lower Third Of Oesophagus

Malignant Neoplasm Of Middle Third Of Oesophagus

Malignant Neoplasm Of Proximal Third Of Esophagus

Malignant Neoplasm Of Upper Third Esophagus

Malignant Tumor Of Abdominal Esophagus

Malignant Tumor Of Distal Third Of Esophagus

Malignant Tumor Of Proximal Third Of Esophagus

Malignant Tumor Of The Middle Third Of The Esophagus

ESCR

Aerodigestive Tract Cancer

Escc

Esophageal Squamous Cell Carcinoma

Cancer, Esophageal

Malignant Neoplasm Of Esophagus

Squamous Cell Carcinoma Of Esophagus

Malignant Neoplasm Of Middle Third Of Esophagus

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Canis familiaris POLR2E VGNC VGNC:44796
Macaca mulatta POLR2E VGNC VGNC:76214
Rattus norvegicus POLR2E RGD RGD:1589817
Mus musculus POLR2E MGD MGI:1913670
Bos taurus POLR2E VGNC VGNC:33139
Felis catus POLR2E VGNC VGNC:68950