1. Gene
  2. SPTBN1 - spectrin beta, non-erythrocytic 1 Gene

SPTBN1 - spectrin beta, non-erythrocytic 1 Gene

中文名称:spectrin beta,非红细胞 1

种属: Homo sapiens

同用名: ELF; SPTB2; DDISBA; HEL102; betaSpII

基因 ID: 6711 | 基因类型: protein coding

关于 SPTBN1

Cytogenetic location: 2p16.2 Genomic coordinates (GRCh38): 2:54,456,327-54,671,446 (from NCBI)

This gene has 7 transcripts (splice variants), 308 orthologues, 36 paralogues and is associated with 3 phenotypes. Ubiquitous expression in fat (RPKM 102.5), lung (RPKM 72.2) and 24 other tissues.

功能概要

Spectrin 是一种肌动蛋白交联和分子支架蛋白,可将质膜连接到肌动蛋白细胞骨架,并在确定细胞形状、跨膜蛋白排列和细胞器组织中发挥作用。它由两个反平行的α-和β-亚基二聚体组成。该基因是 β-血影蛋白基因家族的一员。编码的蛋白质包含一个 N 末端肌动蛋白结合域,以及 17 个参与二聚体形成的血影蛋白重复序列。已发现该基因编码不同异构体的多个转录变体。[RefSeq 提供,2008 年 7 月]

Spectrin is an actin crosslinking and molecular scaffold protein that links the plasma membrane to the actin Cytoskeleton, and functions in the determination of cell shape, arrangement of transmembrane proteins, and organization of organelles. It is composed of two antiparallel dimers of alpha- and beta- subunits. This gene is one member of a family of beta-spectrin genes. The encoded protein contains an N-terminal actin-binding domain, and 17 spectrin repeats which are involved in dimer formation. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

SPTBN1 基因产物(2)

mRNA Protein Name
NM_003128.3 NP_003119.2 spectrin beta chain, non-erythrocytic 1 isoform 1
NM_178313.3 NP_842565.2 spectrin beta chain, non-erythrocytic 1 isoform 2
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables GTPase binding IPI
IPI: 通过物理相互作用推断
24337748 GOA
enables ankyrin binding IPI
IPI: 通过物理相互作用推断
15262991 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
9537418 GOA
enables structural constituent of cytoskeleton IMP
IMP: 通过突变表型推断
17620337 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in Golgi to plasma membrane protein transport IMP
IMP: 通过突变表型推断
17620337 GOA
involved in actin cytoskeleton organization IMP
IMP: 通过突变表型推断
34211179 GOA
involved in central nervous system development IMP
IMP: 通过突变表型推断
34211179 GOA
involved in central nervous system formation IMP
IMP: 通过突变表型推断
34211179 GOA
involved in membrane assembly IMP
IMP: 通过突变表型推断
17620337 GOA
involved in mitotic cytokinesis IMP
IMP: 通过突变表型推断
17620337 GOA
involved in plasma membrane organization IMP
IMP: 通过突变表型推断
17620337 GOA
involved in positive regulation of interleukin-2 production IMP
IMP: 通过突变表型推断
24337748 GOA
involved in positive regulation of protein localization to plasma membrane IMP
IMP: 通过突变表型推断
24337748 GOA
involved in protein localization to plasma membrane IMP
IMP: 通过突变表型推断
17620337 GOA
involved in regulation of protein localization to plasma membrane IGI
IGI: 通过遗传相互作用推断
24337748 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in cytoplasm IDA
IDA: 通过直接分析推断
9537418 GOA
located in cytosol IDA
IDA: 通过直接分析推断
34211179 GOA
located in nucleolus IDA
IDA: 通过直接分析推断
9537418 GOA
located in plasma membrane IDA
IDA: 通过直接分析推断
34211179 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

SPTBN1 蛋白结构

CH

CH: Calponin homology (CH) domain (57 - 158)

CH

CH: Calponin homology (CH) domain (176 - 277)

Spectrin

Spectrin: Spectrin repeat (303 - 411)

Spectrin

Spectrin: Spectrin repeat (423 - 525)

Spectrin

Spectrin: Spectrin repeat (530 - 636)

Spectrin

Spectrin: Spectrin repeat (639 - 742)

Spectrin

Spectrin: Spectrin repeat (745 - 847)

Spectrin

Spectrin: Spectrin repeat (851 - 952)

Spectrin

Spectrin: Spectrin repeat (957 - 1060)

Spectrin

Spectrin: Spectrin repeat (1063 - 1166)

Spectrin

Spectrin: Spectrin repeat (1169 - 1257)

Spectrin

Spectrin: Spectrin repeat (1276 - 1376)

Spectrin

Spectrin: Spectrin repeat (1381 - 1482)

Spectrin

Spectrin: Spectrin repeat (1486 - 1590)

Spectrin

Spectrin: Spectrin repeat (1592 - 1696)

Spectrin

Spectrin: Spectrin repeat (1698 - 1801)

Spectrin

Spectrin: Spectrin repeat (1805 - 1907)

Spectrin

Spectrin: Spectrin repeat (1914 - 2014)

Spectrin

Spectrin: Spectrin repeat (2018 - 2097)

PH_9

PH_9: Pleckstrin homology domain (2201 - 2302)

  • 0
  • 400
  • 800
  • 1200
  • 1600
  • 2000
  • 2364 a.a.
蛋白主名 其他名称

spectrin beta chain, non-erythrocytic 1

beta-G spectrin

SPTBN1 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
SPTBN1 Q01082 NF2 Homo sapiens P35240-3 9537418
种属内
SPTBN1 Q01082 NF2 Homo sapiens P35240-3
Y2H
11779178
种属内
SPTBN1 Q01082 SPTAN1 Homo sapiens Q13813
SPR
12820899
种属内
SPTBN1 Q01082 SPTAN1 Homo sapiens Q13813 30021884
种属内
SPTBN1 Q01082 CDC5L Homo sapiens Q99459
Y2H
17043677
种属内
SPTBN1 Q01082 SPTA1 Homo sapiens P02549
SPR
12820899
种属内
SPTBN1 Q01082 DISC1 Homo sapiens Q9NRI5
Y2H
17043677
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Developmental Delay, Impaired Speech, And Behavioral Abnormalities

DDISBA

Pervasive Developmental Disorder

Pervasive Development Disorder

Pervasive Developmental Disorders

Pervasive Child Development Disorders

Autistic Behavior

Autism Spectrum Disorders

Rare Pervasive Developmental Disorder

Rare Asd

Rare Pdd

Rare Autism Spectrum Disorder

Neurodevelopmental Disorder With Or Without Hypotonia, Seizures, And Cerebellar Atrophy

Glycosylphosphatidylinositol Biosynthesis Defect 13

Neurodevelopmental Disorder With Hypotonia And Cerebellar Atrophy, With Or Without Seizures

Gpibd13

NEDHCAS

Glycosylphosphatidylinositol Biosynthesis Defect 22

Gpibd22

NEDHSCA

Intellectual Developmental Disorder, Autosomal Recessive 53, Formerly

Mrt53, Formerly

Mental Retardation, Autosomal Recessive 53, Formerly

Early-Onset Epilepsy-Intellectual Disability-Brain Anomalies Syndrome

Congenital Disorder Of Glycosylation Due To Pigg Deficiency

Pigg-Cdg

Intellectual Developmental Disorder, Autosomal Recessive 53

MRT53

Non-Specific Syndromic Intellectual Disability

Complex Neurodevelopmental Disorder

Acoustic Neuroma

Neurofibromatosis Type 2

Vestibular Schwannoma

Acoustic Neurinoma

Bilateral Acoustic Neurofibromatosis

Nf2

Acoustic Neurilemoma

Cerebellopontine Angle Tumor

Neurofibromatosis Central Type

Neurofibromatosis Type Ii

Vestibular Neurilemmoma

Acoustic Tumor

Neurinoma Of The Acoustic Nerve

Acoustic Neurinoma Bilateral

Acoustic Schwannomas Bilateral

Banf

Central Neurofibromatosis

Familial Acoustic Neuromas

Neurofibromatosis 2

Neurofibromatosis Type 2 Merlin

Schwannoma, Acoustic, Bilateral

Neuroma Acoustic

Neuroma, Acoustic

Familial Acoustic Neuroma

Familial Vestibular Schwannoma

Neurofibromatosis, Central Type

Nf2 - [Neurofibromatosis Type 2]

Occipital Lobe Neoplasm

Neoplasm Of Occipital Lobe

Malignant Neoplasm Of Occipital Lobe

Tumor Of Occipital Lobe

Spinocerebellar Ataxia 5

Spinocerebellar Ataxia Type 5

SCA5

Spinocerebellar Ataxia-5

Ataxia, Spinocerebellar, Type 5

Beckwith-Wiedemann Syndrome

Wiedemann-Beckwith Syndrome

BWS

Exomphalos-Macroglossia-Gigantism Syndrome

Emg Syndrome

Beckwith-Wiedemann Syndrome Due To Cdkn1c Mutation

Emg Abnormality

Wbs

Exomphalos Macroglossia Gigantism Syndrome

Beckwith-Wiedemann Syndrome Due To Nsd1 Mutation

Macroglossia Exomphalos Gigantism

Osteoporosis

Postmenopausal Osteoporosis

Osteoporosis, Postmenopausal

Bone Mineral Density Quantitative Trait Locus

Bmnd

Osteoporosis, Involutional

Osteoporosis, Susceptibility To

Osteoporosis, Postmenopausal, Susceptibility

Bone Mineral Density Variation Qtl, Osteoporosis

OSTEOP

Involutional Osteoporosis

Senile Osteoporosis

Osteoporosis Postmenopausal

Bone Mineral Density, Quantitative Trait Locus

Osteoporosis, Senile

Idiopathic Osteoporosis

Bone Rarefaction Nos

Type 1 Osteoporosis

West Syndrome

Infantile Spasms

Infantile Spasms Syndrome

Infantile Spasm

X-Linked Infantile Spasm Syndrome

X-Linked Infantile Spasms

Epileptic Encephalopathy, Early Infantile, 1

Is

Tonic Spasms With Clustering, Arrest Of Psychomotor Development And Hypsarrhythmia On Eeg

West'S Syndrome

Spasms, Infantile

Is -[Infantile Spasm]

Salaam Spasm

Salaam Tic

Early Infantile Epileptic Encephalopathy

Early Infantile Epileptic Encephalopathy With Burst-Suppression

Early Infantile Epileptic Encephalopathy With Suppression Bursts

Eiee

Early Infantile Epileptic Encephalopathy With Suppression-Bursts

Ohtahara Syndrome

Encephalopathy, Epileptic, Early Infantile

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Felis catus SPTBN1 VGNC VGNC:65659
Rattus norvegicus SPTBN1 RGD RGD:727922
Macaca mulatta SPTBN1 VGNC VGNC:77871
Canis familiaris SPTBN1 VGNC VGNC:46775
Bos taurus SPTBN1 VGNC VGNC:35253
Mus musculus SPTBN1 MGD MGI:98388