1. Gene
  2. VPS72 - vacuolar protein sorting 72 homolog Gene

VPS72 - vacuolar protein sorting 72 homolog Gene

中文名称:液泡蛋白分选 72 同系物

种属: Homo sapiens

同用名: YL1; CFL1; Swc2; YL-1; TCFL1

基因 ID: 6944 | 基因类型: protein coding

关于 VPS72

Cytogenetic location: 1q21.3 Genomic coordinates (GRCh38): 1:151,176,304-151,190,197 (from NCBI)

This gene has 5 transcripts (splice variants) and 202 orthologues. Ubiquitous expression in brain (RPKM 14.7), prostate (RPKM 14.0) and 25 other tissues.

功能概要

该基因编码的蛋白质是两个多组分复合物的共享亚基,即组蛋白乙酰转移酶复合物 TRRAP/TIP60 以及含有染色质重塑 SRCAP 的复合物。 TRRAP/TIP60 复合物乙酰化对转录调节、双链 DNA 断裂修复和细胞凋亡很重要的核小体组蛋白。含有 SRCAP 的复合物催化组蛋白 H2A 与组蛋白变体 Htz1 (H2AFZ) 交换到核小体中。这种蛋白质可能负责结合 H2AFZ,后者在染色体分离中起作用。这种蛋白质也可能在调节长期造血干细胞活性方面发挥作用。可变剪接导致编码不同蛋白质亚型的多个转录变体。[RefSeq 提供,2012 年 8 月]

The protein encoded by this gene is a shared subunit of two multi-component complexes, the Histone Acetyltransferase complex TRRAP/TIP60 as well as the chromatin remodeling SRCAP-containing complex. The TRRAP/TIP60 complex acetylates nucleosomal histones important for transcriptional regulation, double strand DNA break repair and Apoptosis. The SRCAP-containing complex catalyzes the exchange of histone H2A with the histone variant Htz1 (H2AFZ) into nucleosomes. This protein may be responsible for binding H2AFZ, which has a role in chromosome segregation. This protein may also have a role in regulating long-term hematopoietic stem cell activity. Alternative splicing results in multiple transcript variants that encode different protein isoforms. [provided by RefSeq, Aug 2012]

VPS72 基因产物(3)

mRNA Protein Name
NM_001271087.2 NP_001258016.1 vacuolar protein sorting-associated protein 72 homolog isoform 1
NM_001271088.2 NP_001258017.1 vacuolar protein sorting-associated protein 72 homolog isoform 3
NM_005997.3 NP_005988.1 vacuolar protein sorting-associated protein 72 homolog isoform 2
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables histone binding IPI
IPI: 通过物理相互作用推断
26974126 GOA
enables histone chaperone activity IMP
IMP: 通过突变表型推断
26974126 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
15647280 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in positive regulation of double-strand break repair via homologous recombination IDA
IDA: 通过直接分析推断
27153538 GOA
involved in regulation of cell cycle IMP
IMP: 通过突变表型推断
27153538 GOA
involved in transcription initiation-coupled chromatin remodeling IMP
IMP: 通过突变表型推断
26974126 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of NuA4 histone acetyltransferase complex IDA
IDA: 通过直接分析推断
27153538 GOA
part of nucleosome IDA
IDA: 通过直接分析推断
27153538 GOA
part of protein-containing complex IDA
IDA: 通过直接分析推断
14966270 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

VPS72 蛋白结构

YL1

YL1: YL1 nuclear protein (6 - 217)

YL1_C

YL1_C: YL1 nuclear protein C-terminal domain (291 - 319)

  • 0
  • 100
  • 200
  • 300
  • 364 a.a.
蛋白主名 其他名称

vacuolar protein sorting-associated protein 72 homolog

transcription factor-like 1

VPS72 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
VPS72 Q15906 HMBOX1 Homo sapiens Q6NT76
Validated Y2H
25416956
种属内
VPS72 Q15906 RUVBL1 Homo sapiens Q9Y265
Anti Bait CoIP
15647280
种属内
VPS72 Q15906 RUVBL1 Homo sapiens Q9Y265
Anti Tag CoIP
15647280
种属内
VPS72 Q15906 HSF2BP Homo sapiens O75031
Y2H Prey Pooling
32296183
种属内
VPS72 Q15906 HSF2BP Homo sapiens O75031
Y2H Array
32296183
种属内
VPS72 Q15906 MDFI Homo sapiens Q99750
Y2H Array
25416956
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Peripheral Neuropathy With Variable Spasticity, Exercise Intolerance, And Developmental Delay

Combined Oxidative Phosphorylation Deficiency 26

COXPD26

Combined Oxidative Phosphorylation Defect Type 26

PNSED

Oxidative Phosphorylation Deficiency, Combined, Type 26

Brain Compression

Compression Of Brain

Amyotrophic Lateral Sclerosis Type 5

Amyotrophic Lateral Sclerosis 5

Als5

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Bos taurus VPS72 VGNC VGNC:36831
Rattus norvegicus VPS72 RGD RGD:1306121
Felis catus VPS72 VGNC VGNC:66975
Mus musculus VPS72 MGD MGI:1202305
Canis familiaris VPS72 VGNC VGNC:48299
Macaca mulatta VPS72 VGNC VGNC:78560