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  2. SRSF9 - serine and arginine rich splicing factor 9 Gene

SRSF9 - serine and arginine rich splicing factor 9 Gene

中文名称:富丝氨酸和精氨酸的剪接因子 9

种属: Homo sapiens

同用名: SFRS9; SRp30c

基因 ID: 8683 | 基因类型: protein coding

关于 SRSF9

Cytogenetic location: 12q24.31 Genomic coordinates (GRCh38): 12:120,461,672-120,469,748 (from NCBI)

This gene has 6 transcripts (splice variants), 209 orthologues and 8 paralogues. Ubiquitous expression in testis (RPKM 59.8), lymph node (RPKM 55.2) and 25 other tissues.

功能概要

由该基因编码的蛋白质是富含丝氨酸/精氨酸 (SR) 的 pre-mRNA 剪接因子家族的成员,它构成了剪接体的一部分。这些因子中的每一个都包含一个用于结合 RNA 的 RNA 识别基序 (RRM) 和一个用于结合其他蛋白质的 RS 结构域。 RS 结构域富含丝氨酸和精氨酸残基,可促进不同 SR 剪接因子之间的相互作用。除了对 mRNA 剪接至关重要外,SR 蛋白还显示参与 mRNA 从细胞核输出和翻译。已发现该基因的两个假基因,一个在 15 号染色体上,另一个在 21 号染色体上。[RefSeq 提供,2010 年 9 月]

The protein encoded by this gene is a member of the serine/arginine (SR)-rich family of pre-mRNA splicing factors, which constitute part of the spliceosome. Each of these factors contains an RNA recognition motif (RRM) for binding RNA and an RS domain for binding other proteins. The RS domain is rich in serine and arginine residues and facilitates interaction between different SR splicing factors. In addition to being critical for mRNA splicing, the SR proteins have also been shown to be involved in mRNA export from the nucleus and in translation. Two pseudogenes, one on chromosome 15 and the other on chromosome 21, have been found for this gene. [provided by RefSeq, Sep 2010]

SRSF9 基因产物(1)

mRNA Protein Name
NM_003769.3 NP_003760.1 serine/arginine-rich splicing factor 9
基因本体论
  • 分子功能
  • 生物过程
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
10196175 GOA
enables protein domain specific binding IPI
IPI: 通过物理相互作用推断
10749975 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in negative regulation of mRNA splicing, via spliceosome IDA
IDA: 通过直接分析推断
15009664 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

SRSF9 蛋白结构

RRM_1

RRM_1: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (16 - 83)

RRM_1

RRM_1: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (113 - 174)

  • 0
  • 100
  • 200
  • 221 a.a.
蛋白主名 其他名称

serine/arginine-rich splicing factor 9

SR splicing factor 9

SRSF9 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra SRSF9 Q13242 RNPS1 Homo sapiens Q15287
Validated Y2H
32296183
Intra SRSF9 Q13242 HABP4 Homo sapiens Q5JVS0
Y2H
19523114
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Spinocerebellar Ataxia 31

Spinocerebellar Ataxia Type 31

SCA31

Spinocerebellar Ataxia 16q22-Linked

Spinocerebellar Ataxia, 16q22-Linked

Pure Spinocerebellar Ataxia Japanese Type

Sca4 Pure Japanese Type

Ataxia, Spinocerebellar, Type 31

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Rattus norvegicus SRSF9 RGD RGD:1309495
Felis catus SRSF9 VGNC VGNC:80494
Canis familiaris SRSF9 VGNC VGNC:52970
Mus musculus SRSF9 MGD MGI:104896
Bos taurus SRSF9 VGNC VGNC:52832
Macaca mulatta SRSF9 VGNC VGNC:100109