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  2. Vdr - vitamin D receptor Gene

Vdr - vitamin D receptor Gene

中文名称:维生素 D 受体

种属: Rattus norvegicus

同用名: Nr1i1

基因 ID: 24873 | 基因类型: protein coding

关于 Vdr

Primary_assembly 7: 128,987,981-129,037,677 reverse strand.mRatBN7.2:CM026980.1

This gene has 1 transcript (splice variant), 462 orthologues, 19 paralogues and is associated with 109 phenotypes. Biased expression in Kidney (RPKM 182.4), Lung (RPKM 16.2) and 3 other tissues.

功能概要

该基因编码的蛋白可启动骨化三醇结合活动;核受体活性;和序列特异性 DNA 结合活性。参与多个过程,包括对淀粉样蛋白-β 的细胞反应;骨小梁形成的负调节;及甲状旁腺激素分泌的正调节作用。位于多个细胞成分中,包括 T 管;染色质;和核腔。与小窝共定位。用于研究 2A 型维生素 D 依赖性佝偻病。继发性甲状旁腺功能亢进症的生物标志物。该基因的人类直系同源物与多种疾病有关,包括自身免疫性疾病(多种);癌(多发性);脂质贮积症(多种);黑色素瘤(多发性);和肺结核(多发)。与人类 VDR(维生素 D 受体)同源。 [由基因组资源联盟提供,2022 年 4 月]

Enables calcitriol binding activity; nuclear receptor activity; and sequence-specific DNA binding activity. Involved in several processes, including cellular response to amyloid-beta; negative regulation of bone trabecula formation; and positive regulation of parathyroid hormone secretion. Located in several cellular components, including T-tubule; chromatin; and nuclear lumen. Colocalizes with caveola. Used to study vitamin D-dependent rickets type 2A. Biomarker of secondary hyperparathyroidism. Human ortholog(s) of this gene implicated in several diseases, including autoimmune disease (multiple); carcinoma (multiple); lipid storage disease (multiple); melanoma (multiple); and tuberculosis (multiple). Orthologous to human VDR (vitamin D receptor). [provided by Alliance of Genome Resources, Apr 2022]

Vdr 基因产物(1)

mRNA Protein Name
NM_017058.2 NP_058754.2 vitamin D3 receptor
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables calcitriol binding IDA
IDA: 通过直接分析推断
8179318 RGD
enables nuclear receptor activity IDA
IDA: 通过直接分析推断
9579411 RGD
enables protein binding IPI
IPI: 通过物理相互作用推断
19074549 RGD
enables sequence-specific DNA binding IDA
IDA: 通过直接分析推断
16481392 RGD
enables vitamin D binding IDA
IDA: 通过直接分析推断
2829212 RGD
enables vitamin D binding IMP
IMP: 通过突变表型推断
2829212 RGD
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in apoptotic signaling pathway IDA
IDA: 通过直接分析推断
9579411 RGD
involved in cellular response to amyloid-beta IEP
IEP: 通过表达模式推断
23752060 RGD
involved in cellular response to vitamin D IEP
IEP: 通过表达模式推断
9753201 RGD
involved in heart development IEP
IEP: 通过表达模式推断
12107506 RGD
involved in negative regulation of bone trabecula formation IMP
IMP: 通过突变表型推断
32231239 RGD
involved in negative regulation of ossification IMP
IMP: 通过突变表型推断
32231239 RGD
involved in positive regulation of parathyroid hormone secretion IMP
IMP: 通过突变表型推断
32231239 RGD
involved in regulation of calcium ion transport IDA
IDA: 通过直接分析推断
18353900 RGD
involved in response to aldosterone IEP
IEP: 通过表达模式推断
29713904 RGD
involved in response to calcium ion IEP
IEP: 通过表达模式推断
20181667 RGD
involved in response to estradiol IEP
IEP: 通过表达模式推断
10724336 RGD
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in T-tubule IDA
IDA: 通过直接分析推断
20015453 RGD
located in caveola IDA
IDA: 通过直接分析推断
15272054 RGD
located in dense fibrillar component IDA
IDA: 通过直接分析推断
8392883 RGD
located in euchromatin IDA
IDA: 通过直接分析推断
8392883 RGD
located in heterochromatin IDA
IDA: 通过直接分析推断
8392883 RGD
located in nuclear matrix IDA
IDA: 通过直接分析推断
9744521 RGD
located in perinuclear region of cytoplasm IDA
IDA: 通过直接分析推断
9220147 RGD
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

Vdr 蛋白结构

NR_DBD_VDR

NR_DBD_VDR: cd06955 (15 - 121)

NR_LBD_VDR

NR_LBD_VDR: cd06933 (123 - 421)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 423 a.a.
蛋白主名 其他名称

vitamin D3 receptor

1,25-dihydroxyvitamin D3 receptor

nuclear receptor subfamily 1 group I member 1

vitamin D (1,25- dihydroxyvitamin D3) receptor

直系同源

种属 基因名 来源 基因 ID
Homo sapiens Vdr NCBI NCBI:7421
Mus musculus Vdr NCBI NCBI:22337