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  2. TNRC6A - trinucleotide repeat containing adaptor 6A Gene

TNRC6A - trinucleotide repeat containing adaptor 6A Gene

中文名称:含三核苷酸重复序列的适配子 6A

种属: Homo sapiens

同用名: GW1; FAME6; GW182; TNRC6; CAGH26

基因 ID: 27327 | 基因类型: protein coding

关于 TNRC6A

Cytogenetic location: 16p12.1 Genomic coordinates (GRCh38): 16:24,610,205-24,826,218 (from NCBI)

This gene has 18 transcripts (splice variants), 1 gene allele, 205 orthologues, 5 paralogues and is associated with 1 phenotype. Ubiquitous expression in ovary (RPKM 11.5), endometrium (RPKM 10.0) and 25 other tissues.

功能概要

该基因编码含有 6 个蛋白质家族的三核苷酸重复序列的成员。该蛋白质通过 RNA 干扰 (RNAi) 和 MicroRNA 途径在转录后基因沉默中发挥作用。该蛋白质与称为 GW 体或 P 体的细胞质体中的信使 RNA 和 Argonaute 蛋白结合。抑制该基因的表达会使其他 GW 体蛋白离域并损害 RNAi 和 MicroRNA 诱导的基因沉默。[RefSeq 提供,2008 年 7 月]

This gene encodes a member of the trinucleotide repeat containing 6 protein family. The protein functions in post-transcriptional gene silencing through the RNA interference (RNAi) and MicroRNA pathways. The protein associates with messenger RNAs and Argonaute proteins in cytoplasmic bodies known as GW-bodies or P-bodies. Inhibiting expression of this gene delocalizes other GW-body proteins and impairs RNAi and microRNA-induced gene silencing. [provided by RefSeq, Jul 2008]

TNRC6A 基因产物(3)

mRNA Protein Name
NM_001330520.3 NP_001317449.1 trinucleotide repeat-containing gene 6A protein isoform 2
NM_001351850.2 NP_001338779.1 trinucleotide repeat-containing gene 6A protein isoform 3
NM_014494.4 NP_055309.2 trinucleotide repeat-containing gene 6A protein isoform 1
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
19167051 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in P-body assembly IDA
IDA: 通过直接分析推断
31400113 GOA
involved in miRNA-mediated gene silencing by inhibition of translation IDA
IDA: 通过直接分析推断
17671087 GOA
involved in miRNA-mediated post-transcriptional gene silencing IMP
IMP: 通过突变表型推断
23172285 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
is active in P-body IDA
IDA: 通过直接分析推断
31400113 GOA
located in P-body IDA
IDA: 通过直接分析推断
20616046 GOA
part of RISC complex IDA
IDA: 通过直接分析推断
17671087 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

TNRC6A 蛋白结构

Ago_hook

Ago_hook: Argonaute hook (1065 - 1202)

RRM_5

RRM_5: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (1797 - 1851)

  • 0
  • 400
  • 800
  • 1200
  • 1600
  • 1962 a.a.
蛋白主名 其他名称

trinucleotide repeat-containing gene 6A protein

CAG repeat protein 26

TNRC6A 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra TNRC6A Q8NDV7 CNOT1 Homo sapiens A5YKK6
Anti Bait CoIP
21981923
Intra TNRC6A Q8NDV7 AGO3 Homo sapiens Q9H9G7
Confocal
19383768
Intra TNRC6A Q8NDV7 AGO3 Homo sapiens Q9H9G7
Pull Down
19324964
Intra TNRC6A Q8NDV7 AGO3 Homo sapiens Q9H9G7
Anti Tag CoIP
19383768
Intra TNRC6A Q8NDV7 AGO4 Homo sapiens Q9HCK5
Confocal
19383768
Intra TNRC6A Q8NDV7 AGO4 Homo sapiens Q9HCK5
Anti Tag CoIP
19383768
Intra TNRC6A Q8NDV7 PAN3 Homo sapiens Q58A45
Anti Bait CoIP
21981923
Intra TNRC6A Q8NDV7 TRIP13 Homo sapiens Q15645
Y2H Prey Pooling
25416956
Intra TNRC6A Q8NDV7 AGO1 Homo sapiens Q9UL18
Anti Tag CoIP
33961781
Intra TNRC6A Q8NDV7 AGO1 Homo sapiens Q9UL18
Pull Down
19324964
Intra TNRC6A Q8NDV7 AGO1 Homo sapiens Q9UL18
Confocal
19383768
Intra TNRC6A Q8NDV7 AGO1 Homo sapiens Q9UL18
Anti Tag CoIP
19383768
Intra TNRC6A Q8NDV7 AGO1 Homo sapiens Q9UL18
Anti Bait CoIP
22484317
Intra TNRC6A Q8NDV7 AGO2 Homo sapiens Q9UKV8
Anti Bait CoIP
28877994
Intra TNRC6A Q8NDV7 AGO2 Homo sapiens Q9UKV8
PLA
28683311
Intra TNRC6A Q8NDV7 AGO2 Homo sapiens Q9UKV8
Confocal
19383768
Intra TNRC6A Q8NDV7 AGO2 Homo sapiens Q9UKV8
Confocal
28877994
Intra TNRC6A Q8NDV7 AGO2 Homo sapiens Q9UKV8
Anti Tag CoIP
19383768
Intra TNRC6A Q8NDV7 AGO2 Homo sapiens Q9UKV8
Anti Bait CoIP
22484317
Intra TNRC6A Q8NDV7 AGO2 Homo sapiens Q9UKV8
Anti Tag CoIP
21840310
Intra TNRC6A Q8NDV7 PABPC1 Homo sapiens P11940
Anti Bait CoIP
28877994
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Epilepsy, Familial Adult Myoclonic, 6

FAME6

Benign Adult Familial Myoclonic Epilepsy 6

Bafme6

Fcmte6

Cortical Myoclonic Tremor With Epilepsy, Familial, 6

Familial Adult Myoclonic Epilepsy 6

Familial Cortical Myoclonic Tremor And Epilepsy 6

Epilepsy, Myoclonic, Familial Adult, Type 6

Epilepsy, Familial Adult Myoclonic, 1

FAME1

Benign Adult Familial Myoclonic Epilepsy 1

Bafme1

Fcmte1

Cortical Myoclonic Tremor With Epilepsy, Familial, 1

Familial Adult Myoclonic Epilepsy 1

Familial Cortical Myoclonic Tremor And Epilepsy 1

Epilepsy, Myoclonic, Familial Adult, Type 1

Epilepsy, Familial Adult Myoclonic, 7

FAME7

Bafme7

Fcmte7

Benign Adult Familial Myoclonic Epilepsy 7

Cortical Myoclonic Tremor With Epilepsy, Familial, 7

Familial Adult Myoclonic Epilepsy 7

Familial Cortical Myoclonic Tremor And Epilepsy 7

Benign Adult Familial Myoclonic Epilepsy 27

Epilepsy, Myoclonic, Familial Adult, Type 7

Epilepsy, Familial Adult Myoclonic, 2

FAME2

Benign Adult Familial Myoclonic Epilepsy 2

Bafme2

Fcmte2

Adcme

Cortical Myoclonic Tremor With Epilepsy, Familial, 2

Cortical Myoclonus And Epilepsy, Autosomal Dominant

Familial Adult Myoclonic Epilepsy 2

Epilepsy, Myoclonic, Benign Adult Familial, Type 2

Autosomal Dominant Cortical Myoclonus And Epilepsy

Familial Cortical Myoclonic Tremor And Epilepsy 2

Epilepsy, Myoclonic, Familial Adult, Type 2

Epilepsy, Familial Adult Myoclonic, 3

FAME3

Fcmte3

Cortical Myoclonic Tremor With Epilepsy, Familial, 3

Familial Adult Myoclonic Epilepsy 3

Familial Cortical Myoclonic Tremor And Epilepsy 3

Epilepsy, Myoclonic, Familial Adult, Type 3

Epilepsy, Familial Adult Myoclonic, 4

FAME4

Fcmte4

Cortical Myoclonic Tremor With Epilepsy, Familial, 4

Familial Adult Myoclonic Epilepsy 4

Epilepsy, Myoclonic, Familial Adult, 4

Familial Cortical Myoclonic Tremor And Epilepsy 4

Epilepsy, Myoclonic, Familial Adult, Type 4

Familial Adult Myoclonic Epilepsy

Benign Adult Familial Myoclonus Epilepsy

Bafme

Benign Adult Familial Myoclonic Epilepsy

Fame

Familial Cortical Myoclonic Tremor And Epilepsy

Fcmte

Adcme

Autosomal Dominant Cortical Myoclonus And Epilepsy

Fam

Epilepsy, Myoclonic, Familial Adult

Epilepsy, Myoclonic, Benign Adult Familial, Type 2

Cervical Non-Keratinizing Squamous Cell Carcinoma
Granulomatous Disease, Chronic, Autosomal Recessive, 3

CGD3

Autosomal Recessive Chronic Granulomatous Disease Cytochrome B-Positive Type Iii

Granulomatous Disease, Chronic, Autosomal Recessive, Cytochrome B-Positive, Type 3

Granulomatous Disease, Chronic, Autosomal Recessive, Cytochrome B-Positive, Type Iii

Cgd, Autosomal Recessive Cytochrome B-Positive, Type Iii

Granulomatous Disease, Chronic, Due To Ncf4 Deficiency

Chronic Granulomatous Disease 3, Autosomal Recessive

Autosomal Recessive Chronic Granulomatous Disease 3

Autosomal Recessive Cytochrome B-Positive Cgd Type Iii

Cdg3

Chronic Granulomatous Disease Due To Ncf4 Deficiency

Cgd Autosomal Recessive Cytochrome B-Positive Type Iii

Chronic Granulomatous Disease Autosomal Recessive Cytochrome B-Positive Type Iii

Granulomatous Disease Chronic Due To Ncf4 Deficiency

Granulomatous Disease, Chronic, Autosomal Recessive Cytochrome B-Positive, Type 3

Mild Cognitive Impairment
Epilepsy

Epilepsy Syndrome

Epileptic Syndrome

Epilepsies

Symptomatic Epilepsies

Post Traumatic Epilepsy

Traumatic Epilepsy

Traumatic Epileptic

Epilepsy Due To Hippocampal Sclerosis

Epilepsy With Ammon'S Horn Sclerosis

Epilepsy Due To Cortical Dysplasia

Epilepsy Due To Neuronal Migration Disorders

Adolescence-Adult Electroclinical Syndrome
疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Bos taurus TNRC6A VGNC VGNC:36204
Felis catus TNRC6A VGNC VGNC:80697
Canis familiaris TNRC6A VGNC VGNC:47699
Macaca mulatta TNRC6A VGNC VGNC:78611
Mus musculus TNRC6A MGD MGI:2385292
Rattus norvegicus TNRC6A RGD RGD:1307268