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  2. Snca - synuclein alpha Gene

Snca - synuclein alpha Gene

中文名称:突触核蛋白 α

种属: Rattus norvegicus

基因 ID: 29219 | 基因类型: protein coding

关于 Snca

Primary_assembly 4: 89,696,420-89,796,262 reverse strand.mRatBN7.2:CM026977.1

This gene has 4 transcripts (splice variants), 189 orthologues, 2 paralogues and is associated with 35 phenotypes. Biased expression in Brain (RPKM 542.3), Spleen (RPKM 92.9) and 1 other tissue.

功能概要

该基因编码的蛋白可启动多种功能,包括磷脂酶结合活性;蛋白质 N-末端结合活性;和微管蛋白结合活性。涉及多个过程,包括对可卡因的行为反应;氮化合物代谢过程的负调控;和对地昔帕明的反应。位于几种细胞成分中,包括细胞质囊泡;远端轴突;和线粒体。用于研究帕金森病和苯丙胺滥用。精神抑郁症和神经鞘瘤的生物标志物。该基因的人类直系同源物与阿尔茨海默病有关;路易体痴呆;帕金森病;帕金森病 1;和帕金森病 4. 与人类 SNCA(突触核蛋白 alpha)同源。 [由基因组资源联盟提供,2022 年 4 月]

Enables several functions, including Phospholipase binding activity; protein N-terminus binding activity; and tubulin binding activity. Involved in several processes, including behavioral response to cocaine; negative regulation of nitrogen compound metabolic process; and response to desipramine. Located in several cellular components, including cytoplasmic vesicle; distal axon; and mitochondrion. Used to study Parkinson's disease and amphetamine abuse. Biomarker of mental depression and neurilemmoma. Human ortholog(s) of this gene implicated in Alzheimer's disease; Lewy body dementia; Parkinson's disease; Parkinson's disease 1; and Parkinson's disease 4. Orthologous to human SNCA (synuclein alpha). [provided by Alliance of Genome Resources, Apr 2022]

Snca 基因产物(1)

mRNA Protein Name
NM_019169.3 NP_062042.1 alpha-synuclein
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables beta-tubulin binding IDA
IDA: 通过直接分析推断
18800064 RGD
enables enzyme binding IPI
IPI: 通过物理相互作用推断
11943812 RGD
enables microtubule binding IDA
IDA: 通过直接分析推断
11698390 RGD
enables phospholipase binding IPI
IPI: 通过物理相互作用推断
11821392 RGD
enables phospholipid binding IDA
IDA: 通过直接分析推断
11679584 RGD
enables protein binding IPI
IPI: 通过物理相互作用推断
11032911 RGD
enables protein domain specific binding IPI
IPI: 通过物理相互作用推断
11821392 RGD
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in behavioral response to cocaine IMP
IMP: 通过突变表型推断
18001274 RGD
involved in cellular response to fibroblast growth factor stimulus IEP
IEP: 通过表达模式推断
12562524 RGD
involved in negative regulation of dopamine metabolic process IMP
IMP: 通过突变表型推断
11943812 RGD
involved in negative regulation of neuron apoptotic process IMP
IMP: 通过突变表型推断
17635667 RGD
involved in negative regulation of protein phosphorylation IMP
IMP: 通过突变表型推断
11943812 RGD
involved in response to cocaine IEP
IEP: 通过表达模式推断
14622225 RGD
involved in response to desipramine IEP
IEP: 通过表达模式推断
19818834 RGD
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in axon terminus IDA
IDA: 通过直接分析推断
12127102 RGD
located in cytoplasmic vesicle membrane IDA
IDA: 通过直接分析推断
11943812 RGD
located in growth cone IDA
IDA: 通过直接分析推断
12821390 RGD
located in mitochondrial inner membrane IDA
IDA: 通过直接分析推断
19429081 RGD
located in mitochondrial matrix IDA
IDA: 通过直接分析推断
19429081 RGD
located in mitochondrial outer membrane IDA
IDA: 通过直接分析推断
19429081 RGD
located in mitochondrion IDA
IDA: 通过直接分析推断
11943812 RGD
located in neuronal cell body IDA
IDA: 通过直接分析推断
17275196 RGD
located in nuclear outer membrane IDA
IDA: 通过直接分析推断
11810180 RGD
located in presynapse IDA
IDA: 通过直接分析推断
12000718 RGD
located in ribosome IDA
IDA: 通过直接分析推断
11810180 RGD
located in synaptic vesicle IDA
IDA: 通过直接分析推断
18001274 RGD
located in terminal bouton IDA
IDA: 通过直接分析推断
10777786 RGD
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

Snca 蛋白结构

Synuclein

Synuclein: pfam01387 (0 - 102)

  • 0
  • 100
  • 149 a.a.
蛋白主名 其他名称

alpha-synuclein

synuclein, alpha (non A4 component of amyloid precursor)

直系同源

种属 基因名 来源 基因 ID
Homo sapiens Snca NCBI NCBI:6622
Mus musculus Snca NCBI NCBI:20617