1. Gene
  2. NXF3 - nuclear RNA export factor 3 Gene

NXF3 - nuclear RNA export factor 3 Gene

中文名称:核 RNA 输出因子 3

种属: Homo sapiens

基因 ID: 56000 | 基因类型: protein coding

关于 NXF3

Cytogenetic location: Xq22.1 Genomic coordinates (GRCh38): X:103,075,810-103,093,143 (from NCBI)

This gene has 7 transcripts (splice variants), 247 orthologues and 3 paralogues. Biased expression in testis (RPKM 42.7), gall bladder (RPKM 7.2) and 1 other tissue.

功能概要

该基因是核 RNA 输出因子基因家族的成员之一。该家族的共同结构域特征是非经典 RNP 型 RNA 结合结构域 (RBD) 、4 个富含亮氨酸的重复序列 (LRR) 、允许与 NTF2 相关输出蛋白异二聚化的核转运因子 2 (NTF2) 样结构域- 1 (NXT1) ,以及介导与核孔蛋白相互作用的泛素相关结构域。出口活动需要 LRR 和类似 NTF2 的域。可变剪接似乎是该基因家族中的一种常见机制。该基因编码的蛋白质具有缩短的 LRR 和泛素相关结构域,其 RDB 不能结合 RNA。它位于核质中,但不与核包膜或核仁相关。[RefSeq 提供,2008 年 7 月]

This gene is one member of a family of nuclear RNA export factor genes. Common domain features of this family are a noncanonical RNP-type RNA-binding domain (RBD), 4 leucine-rich repeats (LRRs), a nuclear transport factor 2 (NTF2)-like domain that allows heterodimerization with NTF2-related export protein-1 (NXT1), and a ubiquitin-associated domain that mediates interactions with nucleoporins. The LRRs and NTF2-like domains are required for export activity. Alternative splicing seems to be a common mechanism in this gene family. The encoded protein of this gene has shortened LRR and ubiquitin-associated domains and its RDB is unable to bind RNA. It is located in the nucleoplasm but is not associated with either the nuclear envelope or the nucleolus. [provided by RefSeq, Jul 2008]

NXF3 基因产物(1)

mRNA Protein Name
NM_022052.2 NP_071335.1 nuclear RNA export factor 3

NXF3 蛋白结构

Tap-RNA_bind

Tap-RNA_bind: Tap, RNA-binding (107 - 194)

NTF2

NTF2: Nuclear transport factor 2 (NTF2) domain (345 - 493)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 500
  • 531 a.a.
蛋白主名 其他名称

nuclear RNA export factor 3

TAP-like protein 3

NXF3 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
NXF3 Q9H4D5 NXT2 Homo sapiens Q9NPJ8-3
Complementation
32296183
种属内
NXF3 Q9H4D5 NXT2 Homo sapiens Q9NPJ8-3
Validated Y2H
32296183
种属内
NXF3 Q9H4D5 NXT2 Homo sapiens Q9NPJ8-3
MAPPIT
32296183
种属内
NXF3 Q9H4D5 SKIL Homo sapiens P12757
Validated Y2H
25416956
种属内
NXF3 Q9H4D5 SKIL Homo sapiens P12757
Y2H Prey Pooling
25416956
种属内
NXF3 Q9H4D5 NXT1 Homo sapiens Q9UKK6
Validated Y2H
32296183
种属内
NXF3 Q9H4D5 NXT1 Homo sapiens Q9UKK6
Y2H Array
25416956
种属内
NXF3 Q9H4D5 NXT1 Homo sapiens Q9UKK6
Anti Tag CoIP
33961781
种属内
NXF3 Q9H4D5 NXT1 Homo sapiens Q9UKK6
Complementation
32296183
种属内
NXF3 Q9H4D5 NXT1 Homo sapiens Q9UKK6
Y2H Array
32296183
种属内
NXF3 Q9H4D5 NXT1 Homo sapiens Q9UKK6
Y2H Prey Pooling
25416956
种属内
NXF3 Q9H4D5 NXT1 Homo sapiens Q9UKK6
MAPPIT
32296183
种属内
NXF3 Q9H4D5 NXT1 Homo sapiens Q9UKK6
Y2H Prey Pooling
32296183
种属内
NXF3 Q9H4D5 NXT1 Homo sapiens Q9UKK6
Y2H Pooling
19060904
种属内
NXF3 Q9H4D5 NXT1 Homo sapiens Q9UKK6
Validated Y2H
25416956
种属内
NXF3 Q9H4D5 NXT1 Homo sapiens Q9UKK6
Y2H Array
19060904
种属内
NXF3 Q9H4D5 NXT2 Homo sapiens Q9NPJ8
Anti Tag CoIP
33961781
种属内
NXF3 Q9H4D5 NXT2 Homo sapiens Q9NPJ8
Y2H Prey Pooling
25416956
种属内
NXF3 Q9H4D5 NXT2 Homo sapiens Q9NPJ8
Y2H
21516116
种属内
NXF3 Q9H4D5 NXT2 Homo sapiens Q9NPJ8
Y2H Array
25416956
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Anterior Horn Cell Disease
疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Macaca mulatta NXF3 VGNC VGNC:75566
Canis familiaris NXF3 VGNC VGNC:44072
Rattus norvegicus NXF3 RGD RGD:1564923
Mus musculus NXF3 MGD MGI:2685230