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  2. H3-4 - H3.4 histone, cluster member Gene

H3-4 - H3.4 histone, cluster member Gene

中文名称:H3.4 组蛋白,簇成员

种属: Homo sapiens

同用名: H3t; H3.4; H3/g; H3FT; H3C16; HIST3H3

基因 ID: 8290 | 基因类型: protein coding

关于 H3-4

Cytogenetic location: 1q42.13 Genomic coordinates (GRCh38): 1:228,424,845-228,425,360 (from NCBI)

This gene has 1 transcript (splice variant), 1 gene allele, 115 orthologues, 20 paralogues and is associated with 1 phenotype.

功能概要

组蛋白是基本的核蛋白,负责真核生物染色体纤维的核小体结构。核小体由大约 146 bp 的 DNA 组成,包裹在由四种核心组蛋白 (H2A、H2B、H3 和 H4) 中的每一种成对组成的组蛋白八聚体周围。染色质纤维通过接头组蛋白 H1 与核小体之间的 DNA 相互作用进一步压缩,形成更高阶的染色质结构。该基因是无内含子的,编码复制依赖组蛋白,该组蛋白是组蛋白 H3 家族的成员。该基因的转录本缺少 polyA 尾巴;相反,它们包含回文终止元素。该基因与染色体 6p22-p21.3 组蛋白基因簇中的其他 H3 基因分开定位。[RefSeq 提供,2015 年 8 月]

Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. Nucleosomes consist of approximately 146 bp of DNA wrapped around a histone octamer composed of pairs of each of the four core histones (H2A, H2B, H3, and H4). The chromatin fiber is further compacted through the interaction of a linker histone, H1, with the DNA between the nucleosomes to form higher order chromatin structures. This gene is intronless and encodes a replication-dependent histone that is a member of the histone H3 family. Transcripts from this gene lack polyA tails; instead, they contain a palindromic termination element. This gene is located separately from the other H3 genes that are in the histone gene cluster on chromosome 6p22-p21.3. [provided by RefSeq, Aug 2015]

H3-4 基因产物(1)

mRNA Protein Name
NM_003493.3 NP_003484.1 histone H3.1t
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
17537733 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in nucleosome assembly IDA
IDA: 通过直接分析推断
25615412 GOA
involved in nucleosome assembly IMP
IMP: 通过突变表型推断
20498094 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of nucleosome IDA
IDA: 通过直接分析推断
20498094 GOA
part of nucleosome IPI
IPI: 通过物理相互作用推断
20498094 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

H3-4 蛋白结构

Histone

Histone: Core histone H2A/H2B/H3/H4 (58 - 132)

  • 0
  • 100
  • 136 a.a.
蛋白主名 其他名称

histone H3.1t

H3 clustered histone 16

H3-4 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra H3-4 Q16695 H4C16 Homo sapiens P62805
GMS
20498094
Intra H3-4 Q16695 H4C16 Homo sapiens P62805
DLS
20498094
Intra H3-4 Q16695 H2AC4 Homo sapiens P04908
Crosslink
30021884
Intra H3-4 Q16695 H2AX Homo sapiens P16104
Crosslink
30021884
Intra H3-4 Q16695 AURKB Homo sapiens Q96GD4
Protein Kinase Assay
29340707
Intra H3-4 Q16695 AURKB Homo sapiens Q96GD4
Anti Bait CoIP
29340707
Intra H3-4 Q16695 NASP Homo sapiens P49321-2
Y2H Prey Pooling
32296183
Intra H3-4 Q16695 NASP Homo sapiens P49321-2
Y2H Array
32296183
Intra H3-4 Q16695 H3C13 Homo sapiens Q71DI3
Crosslink
30021884
Intra H3-4 Q16695 CBX5 Homo sapiens P45973
Crosslink
30021884
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Colon Leiomyoma

Colonic Leiomyoma

Male Infertility

Infertility, Male

Infertility Male

Male Sterility

Absolute Infertility

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Rattus norvegicus H3-4 RGD RGD:1583877
Macaca mulatta H3-4 VGNC VGNC:109730
Mus musculus H3-4 MGD MGI:3651326