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  2. RAE1 - ribonucleic acid export 1 Gene

RAE1 - ribonucleic acid export 1 Gene

中文名称:核糖核酸输出 1

种属: Homo sapiens

同用名: Gle2; MIG14; MRNP41; Mnrp41; dJ481F12.3; dJ800J21.1

基因 ID: 8480 | 基因类型: protein coding

关于 RAE1

Cytogenetic location: 20q13.31 Genomic coordinates (GRCh38): 20:57,351,255-57,379,202 (from NCBI)

This gene has 9 transcripts (splice variants), 216 orthologues and 2 paralogues. Broad expression in testis (RPKM 35.7), bone marrow (RPKM 13.2) and 24 other tissues.

功能概要

已证明 Schizosaccharomyces pombe Rae1 和 Saccharomyces cerevisiae Gle2 基因的突变会导致含有 poly (A) 的 mRNA 在细胞核中积累,表明编码的蛋白质参与 RNA 输出。该基因编码的蛋白质是酵母 Rae1 的同系物。它包含四个 WD40 基序,并已显示定位到核质中的不同焦点、核边缘和整个细胞质中的网状结构。该基因被认为参与核质转运,并直接或间接地将细胞质 mRNP 连接到细胞骨架。已发现该基因编码相同蛋白质的可变剪接转录物变体。[RefSeq 提供,2008 年 7 月]

Mutations in the Schizosaccharomyces pombe Rae1 and Saccharomyces cerevisiae Gle2 genes have been shown to result in accumulation of poly(A)-containing mRNA in the nucleus, suggesting that the encoded proteins are involved in RNA export. The protein encoded by this gene is a homolog of yeast Rae1. It contains four WD40 motifs, and has been shown to localize to distinct foci in the nucleoplasm, to the nuclear rim, and to meshwork-like structures throughout the cytoplasm. This gene is thought to be involved in nucleocytoplasmic transport, and in directly or indirectly attaching cytoplasmic mRNPs to the Cytoskeleton. Alternatively spliced transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Jul 2008]

RAE1 基因产物(2)

mRNA Protein Name
NM_001015885.2 NP_001015885.1 mRNA export factor RAE1
NM_003610.4 NP_003601.1 mRNA export factor RAE1
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables RNA binding IDA
IDA: 通过直接分析推断
9256445 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
17172455 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in regulation of mitotic spindle organization IMP
IMP: 通过突变表型推断
17172455 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in mitotic spindle pole IMP
IMP: 通过突变表型推断
17172455 GOA
located in nuclear envelope IDA
IDA: 通过直接分析推断
9256445 GOA
part of nuclear pore IDA
IDA: 通过直接分析推断
9256445 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

RAE1 蛋白结构

WD40

WD40: WD domain, G-beta repeat (37 - 70)

WD40

WD40: WD domain, G-beta repeat (85 - 114)

WD40

WD40: WD domain, G-beta repeat (126 - 157)

WD40

WD40: WD domain, G-beta repeat (275 - 301)

  • 0
  • 100
  • 200
  • 300
  • 368 a.a.
蛋白主名 其他名称

mRNA export factor RAE1

RAE1 RNA export 1 homolog

RAE1 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Cross RAE1 P78406 ns6_sars2 SARS-CoV-2 P0DTC6
Y2H Array
36217030
Intra RAE1 P78406 NUP98 Homo sapiens P52948
Anti Bait CoIP
18832153
Intra RAE1 P78406 NUP98 Homo sapiens P52948
Anti Bait CoIP
17172455
Intra RAE1 P78406 NUP98 Homo sapiens P52948
Anti Tag CoIP
33961781
Intra RAE1 P78406 NUMA1 Homo sapiens Q14980
Pull Down
17172455
Intra RAE1 P78406 NUMA1 Homo sapiens Q14980
Anti Bait CoIP
17172455
Intra RAE1 P78406 NUMA1 Homo sapiens Q14980
Anti Tag CoIP
17172455
Intra RAE1 P78406 SMC1A Homo sapiens Q14683
Anti Bait CoIP
18832153
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Lethal Congenital Contracture Syndrome 1

LCCS1

Multiple Contracture Syndrome, Finnish Type

Lccs

Lethal Autosomal Recessive Syndrome Of Multiple Congenital Contractures

Lethal Congenital Contracture Syndrome Type 1

Herva Disease

Multiple Contracture Syndrome Finnish Type

Contracture Syndrome, Lethal, Congenital, Type 1

Lethal Congenital Contracture Syndrome

Lccs

Lethal Congenital Contracture Syndrome 1

Anterior Horn Cell Disease
疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Bos taurus RAE1 VGNC VGNC:33692
Mus musculus RAE1 MGD MGI:1913929
Felis catus RAE1 VGNC VGNC:69219
Canis familiaris RAE1 VGNC VGNC:45324
Macaca mulatta RAE1 VGNC VGNC:82216
Rattus norvegicus RAE1 RGD RGD:1311540