1. Gene
  2. CBX4 - chromobox 4 Gene

CBX4 - chromobox 4 Gene

中文名称:色盒 4

种属: Homo sapiens

同用名: PC2; NBP16

基因 ID: 8535 | 基因类型: protein coding

关于 CBX4

Cytogenetic location: 17q25.3 Genomic coordinates (GRCh38): 17:79,833,156-79,839,440 (from NCBI)

This gene has 4 transcripts (splice variants), 268 orthologues and 8 paralogues. Broad expression in bone marrow (RPKM 17.4), spleen (RPKM 5.9) and 24 other tissues.

功能概要

启用 SUMO 绑定活动;相扑连接酶活性;和酶结合活性。参与 RNA 聚合酶 II 对转录的负调控。位于核体。 PRC1 复合体的一部分。与肝细胞癌有关。肝细胞癌的生物标志物。 [由基因组资源联盟提供,2022 年 4 月]

Enables SUMO binding activity; SUMO Ligase activity; and Enzyme binding activity. Involved in negative regulation of transcription by RNA polymerase II. Located in nuclear body. Part of PRC1 complex. Implicated in hepatocellular carcinoma. Biomarker of hepatocellular carcinoma. [provided by Alliance of Genome Resources, Apr 2022]

CBX4 基因产物(1)

mRNA Protein Name
NM_003655.3 NP_003646.2 E3 SUMO-protein ligase CBX4
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables SUMO binding IDA
IDA: 通过直接分析推断
20176810 GOA
enables SUMO ligase activity IDA
IDA: 通过直接分析推断
27068747 GOA
enables SUMO transferase activity EXP
EXP: 通过实验结果推断
12679040 GOA
enables enzyme binding IPI
IPI: 通过物理相互作用推断
17087506 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
16169070 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in negative regulation of DNA-templated transcription IDA
IDA: 通过直接分析推断
18567530 GOA
involved in negative regulation of transcription by RNA polymerase II IMP
IMP: 通过突变表型推断
21282530 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of PRC1 complex IDA
IDA: 通过直接分析推断
12167701 GOA
part of PcG protein complex IDA
IDA: 通过直接分析推断
21282530 GOA
located in nucleus IDA
IDA: 通过直接分析推断
9367786 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

CBX4 蛋白结构

Chromo

Chromo: Chromo (CHRromatin Organisation MOdifier) domain (11 - 60)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 500
  • 560 a.a.
蛋白主名 其他名称

E3 SUMO-protein ligase CBX4

NS5ATP1-binding protein 16

CBX4 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra CBX4 O00257 BMI1 Homo sapiens P35226
Anti Tag CoIP
26496610
Intra CBX4 O00257 BMI1 Homo sapiens P35226
TAP
27705803
Intra CBX4 O00257 BMI1 Homo sapiens P35226
Anti Bait CoIP
22078878
Intra CBX4 O00257 YWHAB Homo sapiens P31946
Anti Bait CoIP
22078878
Intra CBX4 O00257 HIF1A Homo sapiens Q16665
Anti Tag CoIP
24434214
Intra CBX4 O00257 HIF1A Homo sapiens Q16665
CH-IP
24434214
Intra CBX4 O00257 HIF1A Homo sapiens Q16665
Pull Down
24434214
Intra CBX4 O00257 CBX8 Homo sapiens Q9HC52
Anti Bait CoIP
17332741
Intra CBX4 O00257 CBX8 Homo sapiens Q9HC52
Anti Tag CoIP
26496610
Intra CBX4 O00257 RNF2 Homo sapiens Q99496
TAP
27705803
Intra CBX4 O00257 RNF2 Homo sapiens Q99496
Anti Tag CoIP
26496610
Intra CBX4 O00257 SUMO1 Homo sapiens P63165
Confocal
20098713
Intra CBX4 O00257 SUMO1 Homo sapiens P63165
Pull Down
20098713
Intra CBX4 O00257 CTBP1 Homo sapiens Q13363
Anti Tag CoIP
20098713
Intra CBX4 O00257 CTBP1 Homo sapiens Q13363
Confocal
20098713
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Hepatocellular Carcinoma

Liver Cancer

Primary Liver Cancer

HCC

Hepatoma

Malignant Neoplasm Of Liver

Liver Neoplasms

Cancer, Hepatocellular

Liver Cell Carcinoma

Lcc

Hepatoblastoma, Somatic

Hepatic Cancer

Primary Malignant Neoplasm Of Liver

Rare Tumor Of Liver And Intrahepatic Biliary Tract

Hepatocellular Carcinoma, Somatic

Hepatocellular Carcinoma, Childhood Type, Somatic

Hepatocellular Cancer, Somatic

Ca Liver - Primary

Hepatic Neoplasm

Malignant Hepato-Biliary Neoplasm

Malignant Neoplasm Of Liver, Not Specified As Primary Or Secondary

Malignant Neoplasm Of Liver, Primary

Malignant Tumor Of Liver

Neoplasm Of Liver

Non-Resectable Primary Hepatic Malignant Neoplasm

Resectable Malignant Neoplasm Of Liver

Resectable Malignant Neoplasm Of The Liver

Primary Liver Carcinoma

Primary Malignant Liver Neoplasm

Primary Cancer Of Liver

Primary Tumor Of The Liver

Rare Tumor Of Liver And Ibt

Hepatocellular Cancer

Neoplasm Of The Liver

Carcinoma, Hepatocellular

Hepatomas

Liver Neoplasm

Liver Carcinoma

Liver And Intrahepatic Biliary Tract Carcinoma

Malignant Hepatobiliary Neoplasm

Adult Primary Hepatocellular Carcinoma

Hepatoblastoma

Carcinoma Of Liver

Malignant Liver Tumour

Malignant Hepatic Tumour

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Rattus norvegicus CBX4 RGD RGD:1587243
Canis familiaris CBX4 VGNC VGNC:54929
Macaca mulatta CBX4 VGNC VGNC:70558
Mus musculus CBX4 MGD MGI:1195985
Felis catus CBX4 VGNC VGNC:98768
Bos taurus CBX4 VGNC VGNC:55784