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  2. TSSC4 - tumor suppressing subtransferable candidate 4 Gene

TSSC4 - tumor suppressing subtransferable candidate 4 Gene

中文名称:肿瘤抑制亚转移候选物 4

种属: Homo sapiens

基因 ID: 10078 | 基因类型: protein coding

关于 TSSC4

Cytogenetic location: 11p15.5 Genomic coordinates (GRCh38): 11:2,400,750-2,403,876 (from NCBI)

This gene has 10 transcripts (splice variants) and 129 orthologues. Ubiquitous expression in testis (RPKM 10.6), bone marrow (RPKM 6.3) and 25 other tissues.

功能概要

该基因是位于 11p15.5 印迹基因域 (一个重要的肿瘤抑制基因区域) 的几个肿瘤抑制亚转移片段之一。该区域的改变与 Beckwith-Wiedemann 综合征、肾母细胞瘤、横纹肌肉瘤、肾上腺皮质癌以及肺癌、卵巢癌和乳腺癌有关。该基因位于几个印迹基因之间;然而,该基因以及泛造血表达基因 (PHEMX) 逃脱了印记。该基因可能在涉及该区域的恶性肿瘤和疾病中发挥作用。已发现该基因编码两种不同亚型的几种转录变体。[RefSeq 提供,2014 年 7 月]

This gene is one of several tumor-suppressing subtransferable fragments located in the imprinted gene domain of 11p15.5, an important tumor-suppressor gene region. Alterations in this region have been associated with the Beckwith-Wiedemann syndrome, Wilms tumor, rhabdomyosarcoma, adrenocortical carcinoma, and lung, ovarian, and breast Cancer. This gene is located among several imprinted genes; however, this gene, as well as the pan-hematopoietic expression gene (PHEMX), escapes imprinting. This gene may play a role in malignancies and disease that involve this region. Several transcript variants encoding two different isoforms have been found for this gene. [provided by RefSeq, Jul 2014]

TSSC4 基因产物(5)

mRNA Protein Name
NM_001297658.2 NP_001284587.1 protein TSSC4 isoform a
NM_001297659.2 NP_001284588.1 protein TSSC4 isoform a
NM_001297660.2 NP_001284589.1 protein TSSC4 isoform a
NM_001297661.2 NP_001284590.1 protein TSSC4 isoform b
NM_005706.4 NP_005697.2 protein TSSC4 isoform a
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables molecular sequestering activity IDA
IDA: 通过直接分析推断
35188580 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
21044950 GOA
enables protein-containing complex binding IDA
IDA: 通过直接分析推断
34131137 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in spliceosomal snRNP assembly IDA
IDA: 通过直接分析推断
35188580 GOA
involved in spliceosomal tri-snRNP complex assembly IMP
IMP: 通过突变表型推断
34131137 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of U5 snRNP IDA
IDA: 通过直接分析推断
35188580 GOA
is active in cytoplasm IDA
IDA: 通过直接分析推断
34131137 GOA
is active in nucleus IDA
IDA: 通过直接分析推断
34131137 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

TSSC4 蛋白结构

TSSC4

TSSC4: Tumour suppressing sub-chromosomal transferable candidate 4 (93 - 211)

  • 0
  • 100
  • 200
  • 300
  • 329 a.a.
蛋白主名 其他名称

protein TSSC4

tumor-suppressing STF cDNA 4 protein

TSSC4 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra TSSC4 Q9Y5U2 FLJ13057 Homo sapiens Q53SE7
Validated Y2H
25416956
Intra TSSC4 Q9Y5U2 RNF31 Homo sapiens Q96EP0-3
Y2H Prey Pooling
25416956
Intra TSSC4 Q9Y5U2 RNF31 Homo sapiens Q96EP0-3
Validated Y2H
25416956
Intra TSSC4 Q9Y5U2 TRAF2 Homo sapiens Q12933
Y2H Array
25416956
Intra TSSC4 Q9Y5U2 TRAF2 Homo sapiens Q12933
Y2H Prey Pooling
25416956
Intra TSSC4 Q9Y5U2 KPNA3 Homo sapiens O00505
Y2H
21516116
Intra TSSC4 Q9Y5U2 TRAF1 Homo sapiens Q13077
Validated Y2H
25416956
Intra TSSC4 Q9Y5U2 TRAF1 Homo sapiens Q13077
Y2H Array
25416956
Intra TSSC4 Q9Y5U2 GOLGA2 Homo sapiens Q08379
Validated Y2H
25416956
Intra TSSC4 Q9Y5U2 GOLGA2 Homo sapiens Q08379
Y2H Array
25416956
Intra TSSC4 Q9Y5U2 WFS1 Homo sapiens O76024
Validated Y2H
32814053
Intra TSSC4 Q9Y5U2 WFS1 Homo sapiens O76024
Y2H Array
32814053
Intra TSSC4 Q9Y5U2 WFS1 Homo sapiens O76024
Y2H Pooling
32814053
Intra TSSC4 Q9Y5U2 TERF2IP Homo sapiens Q9NYB0
Pull Down
21044950
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Beckwith-Wiedemann Syndrome

Wiedemann-Beckwith Syndrome

BWS

Exomphalos-Macroglossia-Gigantism Syndrome

Emg Syndrome

Beckwith-Wiedemann Syndrome Due To Cdkn1c Mutation

Emg Abnormality

Wbs

Exomphalos Macroglossia Gigantism Syndrome

Beckwith-Wiedemann Syndrome Due To Nsd1 Mutation

Macroglossia Exomphalos Gigantism

Cardiofaciocutaneous Syndrome 2

CFC2

Cardiofaciocutaneous Syndrome, Type 2

Camptodactyly-Tall Stature-Scoliosis-Hearing Loss Syndrome

Catshl Syndrome

Camptodactyly-Tall Stature-Scoliosis-Deafness Syndrome

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Rattus norvegicus TSSC4 RGD RGD:1307043
Canis familiaris TSSC4 VGNC VGNC:56098
Mus musculus TSSC4 MGD MGI:1861712
Macaca mulatta TSSC4 VGNC VGNC:101422