1. Gene
  2. TBC1D20 - TBC1 domain family member 20 Gene

TBC1D20 - TBC1 domain family member 20 Gene

中文名称:TBC1 域家族成员 20

种属: Homo sapiens

同用名: WARBM4; C20orf140

基因 ID: 128637 | 基因类型: protein coding

关于 TBC1D20

Cytogenetic location: 20p13 Genomic coordinates (GRCh38): 20:435,480-462,533 (from NCBI)

This gene has 31 transcripts (splice variants), 207 orthologues and is associated with 3 phenotypes. Ubiquitous expression in lung (RPKM 14.1), thyroid (RPKM 13.3) and 25 other tissues.

功能概要

该基因编码的蛋白质属于 Rab 样小 GTP 酶的 GTP 酶激活蛋白家族。编码的蛋白质及其同源 GTP 酶 Rab1 结合丙型肝炎病毒 (HCV) 的非结构蛋白 5A (NS5A) 以介导病毒复制。这种蛋白质的耗尽会抑制病毒的复制和 HCV 感染。该基因的突变与 Warburg 微综合征 4 相关。可变剪接导致多个转录本变体。[RefSeq 提供,2014 年 3 月]

This gene encodes a protein that belongs to a family of GTPase activator proteins of Rab-like small GTPases. The encoded protein and its cognate GTPase, Rab1, bind the nonstructural protein 5A (NS5A) of the hepatitis C virus (HCV) to mediate viral replication. Depletion of this protein inhibits replication of the virus and HCV Infection. Mutations in this gene are associated with Warburg micro syndrome 4. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2014]

TBC1D20 基因产物(1)

mRNA Protein Name
NM_144628.4 NP_653229.1 TBC1 domain family member 20
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables GTPase activator activity IDA
IDA: 通过直接分析推断
17684057 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
17684057 GOA
enables small GTPase binding IPI
IPI: 通过物理相互作用推断
17684057 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in COPII-coated vesicle cargo loading IMP
IMP: 通过突变表型推断
17684057 GOA
involved in Golgi organization IMP
IMP: 通过突变表型推断
17684057 GOA
involved in endoplasmic reticulum to Golgi vesicle-mediated transport IMP
IMP: 通过突变表型推断
21680502 GOA
involved in positive regulation by host of viral genome replication IMP
IMP: 通过突变表型推断
17686842 GOA
involved in positive regulation by virus of viral protein levels in host cell IMP
IMP: 通过突变表型推断
17686842 GOA
involved in positive regulation of ER to Golgi vesicle-mediated transport IMP
IMP: 通过突变表型推断
17684057 GOA
involved in positive regulation of GTPase activity IMP
IMP: 通过突变表型推断
17684057 GOA
NOT involved in regulation of cilium assembly IMP
IMP: 通过突变表型推断
17646400 GOA
involved in virion assembly IMP
IMP: 通过突变表型推断
21680502 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in Golgi membrane IDA
IDA: 通过直接分析推断
17684057 GOA
located in endoplasmic reticulum IDA
IDA: 通过直接分析推断
22491470 GOA
located in endoplasmic reticulum membrane IDA
IDA: 通过直接分析推断
17684057 GOA
located in nuclear membrane IDA
IDA: 通过直接分析推断
17684057 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

TBC1D20 蛋白结构

RabGAP-TBC

RabGAP-TBC: Rab-GTPase-TBC domain (63 - 264)

  • 0
  • 100
  • 200
  • 300
  • 403 a.a.
蛋白主名 其他名称

TBC1 domain family member 20

TBC1D20 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
TBC1D20 Q96BZ9 AQP6 Homo sapiens Q13520
Y2H Array
32296183
种属内
TBC1D20 Q96BZ9 AQP6 Homo sapiens Q13520
Y2H Prey Pooling
32296183
种属内
TBC1D20 Q96BZ9 APOC4 Homo sapiens P55056
Y2H Prey Pooling
32296183
种属内
TBC1D20 Q96BZ9 EBP Homo sapiens Q15125
Y2H Prey Pooling
32296183
种属内
TBC1D20 Q96BZ9 EBP Homo sapiens Q15125
Y2H Array
32296183
种属内
TBC1D20 Q96BZ9 TMEM14B Homo sapiens Q9NUH8
Y2H Prey Pooling
32296183
种属内
TBC1D20 Q96BZ9 TMEM14B Homo sapiens Q9NUH8
Validated Y2H
32296183
种属内
TBC1D20 Q96BZ9 TMEM14B Homo sapiens Q9NUH8
Y2H Array
32296183
种属间
TBC1D20 Q96BZ9 P27958-PRO_0000037576 Hepatitis C virus P27958-PRO_0000037576
Y2H
17686842
种属间
TBC1D20 Q96BZ9 P27958-PRO_0000037576 Hepatitis C virus P27958-PRO_0000037576
Confocal
22491470
种属间
TBC1D20 Q96BZ9 P27958-PRO_0000037576 Hepatitis C virus P27958-PRO_0000037576
IF
22491470
种属间
TBC1D20 Q96BZ9 P27958-PRO_0000037576 Hepatitis C virus P27958-PRO_0000037576
Confocal
17686842
种属间
TBC1D20 Q96BZ9 P27958-PRO_0000037576 Hepatitis C virus P27958-PRO_0000037576
Crosslink
17686842
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Warburg Micro Syndrome 4

WARBM4

Micro Syndrome 4

Warburg Micro Syndrome 1

Warburg Micro Syndrome

Micro Syndrome

Warbm

WARBM1

Warburg Sjo Fledelius Syndrome

Warburg-Sjo-Fledelius Syndrome

Micro Syndrome 1

Microcephaly, Microcornea, Congenital Cataract, Intellectual Disability, Optic Atrophy And Hypogenitalism

Hepatitis C Virus

Hepatitis C Virus, Susceptibility To

Hepatitis C Virus Infection, Response To Therapy Of

Hcv

Hcv, Susceptibility To

Hepatitis C Virus, Resistance To

Hepatitis C Virus, Response To Therapy Of

Resistance To Hepatitis C Virus

Warburg Micro Syndrome 2

WARBM2

Micro Syndrome 2

Warburg Micro Syndrome 3

WARBM3

Micro Syndrome 3

Martsolf Syndrome 1

Martsolf Syndrome

Cataract-Intellectual Disability-Hypogonadism Syndrome

MARTS1

Marts

Cataract-Mental Retardation-Hypogonadism

Martsolf

Spastic Diplegia

Diplegic Infantile Cerebral Palsy

Little'S Disease

Cerebral Palsy

Cerebral Spastic Infantile Paralysis

Infantile Diplegic Cerebral Palsy

Infantile Spastic Cerebral Palsy

Littles Disease

Spastic Cerebral Palsy

Rab18 Deficiency
Microphthalmia

Microphthalmos

Isolated Anophthalmia-Microphthalmia Syndrome

Isolated Microphthalmia-Anophthalmia-Coloboma

Simple Microphthalmos

Clinical Anophthalmia

Isolated Anophthalmia - Microphthalmia

Isolated Pure Microphthalmia

Mac Spectrum

Microphthalmia-Anophthalmia-Coloboma Spectrum

Primitive Anophthalmia

Globe Of Eye Small

Small Eyeball

Hypoplasia Of Eye

Isolated Nanophthalmos

Rudimentary Eye

Dysplasia Of Eye

Spastic Cerebral Palsy

Palsy, Cerebral, Spastic

Infantile Hemiplegia Nos

Postnatal Infantile Hemiplegia Nos

Congenital Spastic Hemiplegia

Spastic Hemiplegic Cerebral Palsy

Congenital Hemiplegia Nos

Hemiplegic Cerebral Palsy

Hemiplegic Infantile Cerebral Palsy

Deafness, Onychodystrophy, Osteodystrophy, Mental Retardation, And Seizures Syndrome

Door Syndrome

Doors Syndrome

Digitorenocerebral Syndrome

Autosomal Recessive Deafness-Onychodystrophy Syndrome

Deafness-Onychoosteodystrophy-Intellectual Disability Syndrome

DOORS

Drc Syndrome

Eronen Syndrome

Deafness-Onychodystrophy-Osteodystrophy-Intellectual Disability Syndrome

Brachydactyly Due To Absence Of Distal Phalanges

Deafness-Onychodystrophy-Osteodystrophy-Intellectual Disability-Seizures Syndrome

Deafness, Onychodystrophy, Osteodystrophy, And Mental Retardation Syndrome

Deafness-Oncychodystrophy-Osteodystrophy-Intellectual Disability Syndrome

Autosomal Recessive Hearing Loss-Onychodystrophy Syndrome

Hearing Loss-Onychodystrophy-Osteodystrophy-Intellectual Disability Syndrome

Hearing Loss-Onychodystrophy-Osteodystrophy-Intellectual Disability-Seizures Syndrome

Hearing Loss-Onychoosteodystrophy-Intellectual Disability Syndrome

Deafness, Onychodystrophy, Osteodystrophy, Intellectual Disability, And Seizures Syndrome

Deafness, Congenital Onychodystrophy, Recessive Form

Deafness, Onychodystrophy, Osteodystrophy, Mental Retardation Syndrome

Spastic Quadriplegia

Spastic Quadriplegic Cerebral Palsy

Quadriplegic Infantile Cerebral Palsy

Tetraplegic Infantile Cerebral Palsy

Cerebral Palsy Spastic Quadriplegic

Quadriplegic Cerebral Palsy

Spastic Quadriplegia Cerebral Palsy

Spastic Tetraplegia Cerebral Palsy

Cerebral Palsy, Quadriplegic, Infantile

Cerebral Palsy With Spastic Tetraplegia

Congenital Spastic Quadriplegia

Spastic Tetraplegic Cerebral Palsy

Congenital Quadriplegia Nos

Tetraplegic Cerebral Palsy

Microcephaly

Microencephaly

Microcephalus

Microcephalic

Nanocephaly

Congenital Microcephaly

Brain Hypoplasia

Brain Nondevelopment

Cephalic Hypoplasia

Undeveloped Cerebrum

Undeveloped Brain

Micrencephalon

Micrencephaly

Lens Disease

Lens Diseases

Congenital Nervous System Abnormality

Congenital Neurologic Anomaly

Congenital Nervous System Disorder

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Rattus norvegicus TBC1D20 RGD RGD:1303293
Mus musculus TBC1D20 MGD MGI:1914481
Felis catus TBC1D20 VGNC VGNC:65979
Canis familiaris TBC1D20 VGNC VGNC:47139
Macaca mulatta TBC1D20 VGNC VGNC:78132
Bos taurus TBC1D20 VGNC VGNC:35634