1. Gene
  2. Hdac5 - histone deacetylase 5 Gene

Hdac5 - histone deacetylase 5 Gene

中文名称:组蛋白脱乙酰酶 5

种属: Mus musculus

同用名: HD5; Hdac4; mHDA1; mKIAA0600

基因 ID: 15184 | 基因类型: protein coding

关于 Hdac5

Chromosome 11: 102,085,258-102,120,992 reverse strand.GRCm39:CM001004.3

This gene has 20 transcripts (splice variants), 194 orthologues, 10 paralogues and is associated with 1 phenotype. Ubiquitous expression in lung adult (RPKM 2.5), adrenal adult (RPKM 19.) and 28 other tissues.

功能概要

该基因编码的蛋白可启动多种功能,包括 DNA 结合转录抑制活性、RNA 聚合酶 II 特异性;转录辅抑制活性;和转录辅阻遏物结合活性。涉及多个过程,包括细胞对流体剪切应力的反应;细胞群增殖的正向调节;和调节肌管分化。作用于多个过程的上游或内部,包括大分子代谢过程的负调节;成骨细胞分化的负调节;和成骨细胞发育。位于多个细胞成分中,包括轴突生长锥;染色质;和核体。 RNA 聚合酶 II 转录抑制复合物的一部分。以多种结构表达,包括中枢神经系统;早期胚胎;头骨;感觉器官;和上臂。与人类 HDAC5(组蛋白脱乙酰酶 5)同源。 [由基因组资源联盟提供,2022 年 4 月]

Enables several functions, including DNA-binding transcription repressor activity, RNA polymerase II-specific; transcription corepressor activity; and transcription corepressor binding activity. Involved in several processes, including cellular response to fluid shear stress; positive regulation of cell population proliferation; and regulation of myotube differentiation. Acts upstream of or within several processes, including negative regulation of macromolecule metabolic process; negative regulation of osteoblast differentiation; and osteoblast development. Located in several cellular components, including axonal growth cone; chromatin; and nuclear body. Part of RNA polymerase II transcription repressor complex. Is expressed in several structures, including central nervous system; early embryo; head bone; sensory organ; and upper arm. Orthologous to human HDAC5 (histone deacetylase 5). [provided by Alliance of Genome Resources, Apr 2022]

Hdac5 基因产物(18)

mRNA Protein Name
NM_010412.4 NP_034542.3 histone deacetylase 5 isoform 2
NM_001284250.2 NP_001271179.1 histone deacetylase 5 isoform 5
NM_001405239.1 NP_001392168.1 histone deacetylase 5 isoform 11
NM_001405237.1 NP_001392166.1 histone deacetylase 5 isoform 10
NM_001405234.1 NP_001392163.1 histone deacetylase 5 isoform 8
NM_001284248.2 NP_001271177.1 histone deacetylase 5 isoform 3
NM_001405241.1 NP_001392170.1 histone deacetylase 5 isoform 13
NM_001405233.1 NP_001392162.1 histone deacetylase 5 isoform 7
NM_001405242.1 NP_001392171.1 histone deacetylase 5 isoform 13
NM_001405232.1 NP_001392161.1 histone deacetylase 5 isoform 6
NM_001405238.1 NP_001392167.1 histone deacetylase 5 isoform 11
NM_001361596.2 NP_001348525.1 histone deacetylase 5 isoform 4
NM_001405235.1 NP_001392164.1 histone deacetylase 5 isoform 9
NM_001405236.1 NP_001392165.1 histone deacetylase 5 isoform 9
NM_001284249.2 NP_001271178.1 histone deacetylase 5 isoform 4
NM_001405240.1 NP_001392169.1 histone deacetylase 5 isoform 12
NM_001405244.1 NP_001392173.1 histone deacetylase 5 isoform 14
NM_001077696.2 NP_001071164.1 histone deacetylase 5 isoform 1
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables DNA-binding transcription factor binding IPI
IPI: 通过物理相互作用推断
10748098 MGI
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IMP
IMP: 通过突变表型推断
20181743 MGI
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IDA
IDA: 通过直接分析推断
20181743 MGI
enables RNA polymerase II-specific DNA-binding transcription factor binding IPI
IPI: 通过物理相互作用推断
20123967 MGI
enables histone deacetylase activity IDA
IDA: 通过直接分析推断
10640276 MGI
enables protein binding IPI
IPI: 通过物理相互作用推断
10640276 MGI
enables protein kinase binding IPI
IPI: 通过物理相互作用推断
17468767 MGI
enables transcription corepressor activity IDA
IDA: 通过直接分析推断
10640276 MGI
enables transcription corepressor activity IGI
IGI: 通过遗传相互作用推断
15990875 MGI
enables transcription corepressor binding IPI
IPI: 通过物理相互作用推断
12007404 MGI
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in cellular response to fluid shear stress IDA
IDA: 通过直接分析推断
20181743 MGI
acts upstream of or within heart development IGI
IGI: 通过遗传相互作用推断
15367668 MGI
acts upstream of or within multicellular organismal response to stress IMP
IMP: 通过突变表型推断
17988634 MGI
acts upstream of or within negative regulation of DNA-templated transcription IDA
IDA: 通过直接分析推断
16260608 MGI
acts upstream of or within negative regulation of gene expression IMP
IMP: 通过突变表型推断
23926128 MGI
acts upstream of or within negative regulation of osteoblast differentiation IMP
IMP: 通过突变表型推断
15990875 MGI
acts upstream of or within negative regulation of transcription by RNA polymerase II IDA
IDA: 通过直接分析推断
10640276 MGI
acts upstream of or within negative regulation of transcription by RNA polymerase II IGI
IGI: 通过遗传相互作用推断
15601857 MGI
involved in negative regulation of transcription by RNA polymerase II IMP
IMP: 通过突变表型推断
20181743 MGI
acts upstream of or within osteoblast development IMP
IMP: 通过突变表型推断
15990875 MGI
acts upstream of osteoblast differentiation IMP
IMP: 通过突变表型推断
15990875 MGI
involved in positive regulation of neural precursor cell proliferation IMP
IMP: 通过突变表型推断
20123967 MGI
involved in positive regulation of stem cell proliferation IMP
IMP: 通过突变表型推断
20123967 MGI
involved in regulation of myotube differentiation IDA
IDA: 通过直接分析推断
17468767 MGI
acts upstream of or within regulation of skeletal muscle fiber development IGI
IGI: 通过遗传相互作用推断
17786239 MGI
acts upstream of or within regulation of skeletal muscle fiber differentiation IGI
IGI: 通过遗传相互作用推断
17786239 MGI
involved in renal tubule morphogenesis IMP
IMP: 通过突变表型推断
20181743 MGI
acts upstream of or within response to cocaine IDA
IDA: 通过直接分析推断
17988634 MGI
acts upstream of or within response to cocaine IMP
IMP: 通过突变表型推断
17988634 MGI
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of RNA polymerase II transcription repressor complex IDA
IDA: 通过直接分析推断
12007404 MGI
located in axonal growth cone IDA
IDA: 通过直接分析推断
26157139 MGI
located in chromatin IDA
IDA: 通过直接分析推断
12007404 MGI
located in cytoplasm IDA
IDA: 通过直接分析推断
11081517 MGI
located in cytosol IDA
IDA: 通过直接分析推断
18198354 MGI
located in nuclear body IDA
IDA: 通过直接分析推断
11641275 MGI
is active in nucleus IDA
IDA: 通过直接分析推断
10640276 MGI
located in nucleus IDA
IDA: 通过直接分析推断
11081517 MGI
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

Hdac5 蛋白结构

ClassIIa_HDAC_Gln-rich-N

ClassIIa_HDAC_Gln-rich-N: cl25407 (67 - 154)

HDAC5

HDAC5: cd10007 (670 - 1089)

  • 0
  • 200
  • 400
  • 600
  • 800
  • 1000
  • 1114 a.a.
蛋白主名 其他名称

histone deacetylase 5

histone deacetylase 4

histone deacetylase mHDA1

直系同源

种属 基因名 来源 基因 ID
Homo sapiens Hdac5 NCBI NCBI:10014