1. Gene
  2. Mmp13 - matrix metallopeptidase 13 Gene

Mmp13 - matrix metallopeptidase 13 Gene

中文名称:基质金属肽酶 13

种属: Mus musculus

同用名: Clg; Mmp1; MMP-13

基因 ID: 17386 | 基因类型: protein coding

关于 Mmp13

Chromosome 9: 7,272,514-7,283,331 forward strand.GRCm39:CM001002.3

This gene has 1 transcript (splice variant), 203 orthologues, 23 paralogues and is associated with 12 phenotypes. Biased expression in CNS E18 (RPKM 1.3), limb E14.5 (RPKM .9) and 13 other tissues.

功能概要

该基因编码基质金属蛋白酶家族的一个成员,该家族在伤口愈合、骨骼发育和骨重塑中发挥作用。编码的蛋白质通过去除 N 末端激活肽而被激活,以产生锌依赖性肽链内切酶,该酶可以切割各种天然胶原蛋白,包括 I-IV、X 和 XIV 型。缺乏编码蛋白的小鼠在生长板软骨中表现出严重缺陷以及软骨内骨发育延迟。由于伤口部位的角质形成细胞迁移和血管密度减少,编码蛋白的缺乏也会损害伤口愈合过程。该基因位于 9 号染色体上的其他基质金属蛋白酶基因簇中。[RefSeq 提供,2015 年 6 月]

This gene encodes a member of the matrix metalloproteinase family that plays a role in wound healing, skeletal development and bone remodeling. The encoded protein is activated by the removal of an N-terminal activation peptide to generate a zinc-dependent endopeptidase Enzyme that can cleave various native collagens, including types I - IV, X and XIV. Mice lacking the encoded protein display profound defects in growth plate cartilage as well as a delay in the endochondral bone development. Lack of the encoded protein also impairs the wound healing process due to reduced keratinocyte migration and vascular density at the wound site. This gene is located in a cluster of other matrix metalloproteinase genes on chromosome 9. [provided by RefSeq, Jun 2015]

Mmp13 基因产物(1)

mRNA Protein Name
NM_008607.2 NP_032633.1 collagenase 3 preproprotein
基因本体论
  • 分子功能
  • 生物过程
分子功能 GO 注释 逻辑证据 参考文献 来源
enables metalloendopeptidase activity IDA
IDA: 通过直接分析推断
11953314 MGI
enables peptidase activity IDA
IDA: 通过直接分析推断
15581614 MGI
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in bone mineralization IMP
IMP: 通过突变表型推断
17987127 MGI
acts upstream of or within collagen catabolic process IDA
IDA: 通过直接分析推断
15563592 MGI
involved in collagen catabolic process IMP
IMP: 通过突变表型推断
17987127 MGI
involved in endochondral ossification IMP
IMP: 通过突变表型推断
17987127 MGI
involved in extracellular matrix disassembly IMP
IMP: 通过突变表型推断
17987127 MGI
acts upstream of or within growth plate cartilage development IGI
IGI: 通过遗传相互作用推断
21444811 MGI
acts upstream of or within protein metabolic process IDA
IDA: 通过直接分析推断
11953314 MGI
involved in proteolysis IMP
IMP: 通过突变表型推断
17987127 MGI
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

Mmp13 蛋白结构

PG_binding_1

PG_binding_1: pfam01471 (32 - 91)

Peptidase_M10

Peptidase_M10: pfam00413 (112 - 267)

HX

HX: cd00094 (281 - 471)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 472 a.a.
蛋白主名 其他名称

collagenase 3

collagenase-1

interstitial collagenase

matrix metalloproteinase 13

直系同源

种属 基因名 来源 基因 ID
Homo sapiens Mmp13 NCBI NCBI:4322