1. Gene
  2. GGA3 - golgi associated, gamma adaptin ear containing, ARF binding protein 3 Gene

GGA3 - golgi associated, gamma adaptin ear containing, ARF binding protein 3 Gene

中文名称:含高尔基体相关,伽马适应蛋白耳,ARF 结合蛋白 3

种属: Homo sapiens

基因 ID: 23163 | 基因类型: protein coding

关于 GGA3

Cytogenetic location: 17q25.1 Genomic coordinates (GRCh38): 17:75,223,728-75,262,363 (from NCBI)

This gene has 24 transcripts (splice variants), 279 orthologues and 10 paralogues. Ubiquitous expression in spleen (RPKM 11.9), lymph node (RPKM 11.0) and 25 other tissues.

功能概要

该基因编码高尔基体本地化的伽马适应蛋白耳含 ARF 结合 (GGA) 家族的成员。这个家族包括无处不在的外壳蛋白,它们调节反式高尔基体网络和溶酶体之间的蛋白质运输。这些蛋白质共享一个氨基末端 VHS 结构域,该结构域介导反式高尔基体网络中甘露糖 6-磷酸受体的分选。它们还包含与伽马适应蛋白的耳结构域同源的羧基末端区域。已在该基因中鉴定出多个选择性剪接的转录物变体。[RefSeq 提供,2010 年 2 月]

This gene encodes a member of the Golgi-localized, gamma adaptin ear-containing, ARF-binding (GGA) family. This family includes ubiquitous coat proteins that regulate the trafficking of proteins between the trans-Golgi network and the lysosome. These proteins share an amino-terminal VHS domain which mediates sorting of the mannose 6-phosphate receptors at the trans-Golgi network. They also contain a carboxy-terminal region with homology to the ear domain of gamma-adaptins. Multiple alternatively spliced transcript variants have been identified in this gene. [provided by RefSeq, Feb 2010]

GGA3 基因产物(6)

mRNA Protein Name
NM_001172703.3 NP_001166174.1 ADP-ribosylation factor-binding protein GGA3 isoform 1
NM_001172704.3 NP_001166175.1 ADP-ribosylation factor-binding protein GGA3 isoform 2
NM_001291641.2 NP_001278570.1 ADP-ribosylation factor-binding protein GGA3 isoform 1
NM_001291642.2 NP_001278571.1 ADP-ribosylation factor-binding protein GGA3 isoform 3
NM_014001.5 NP_054720.1 ADP-ribosylation factor-binding protein GGA3 isoform short
NM_138619.4 NP_619525.1 ADP-ribosylation factor-binding protein GGA3 isoform long
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
11387475 GOA
enables protein transporter activity IDA
IDA: 通过直接分析推断
17116753 GOA
enables protein-containing complex binding IDA
IDA: 通过直接分析推断
17116753 GOA
enables small GTPase binding IDA
IDA: 通过直接分析推断
10749927 GOA
enables ubiquitin binding IDA
IDA: 通过直接分析推断
17116753 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in Golgi to plasma membrane protein transport IMP
IMP: 通过突变表型推断
27901063 GOA
involved in negative regulation of amyloid-beta formation IDA
IDA: 通过直接分析推断
17553422 GOA
involved in protein destabilization IDA
IDA: 通过直接分析推断
20484053 GOA
involved in protein localization to cell surface IMP
IMP: 通过突变表型推断
27901063 GOA
involved in protein targeting to lysosome IPI
IPI: 通过物理相互作用推断
17116753 GOA
involved in regulation of protein stability IDA
IDA: 通过直接分析推断
17553422 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in lysosome IDA
IDA: 通过直接分析推断
17116753 GOA
part of protein-containing complex IDA
IDA: 通过直接分析推断
17116753 GOA
located in trans-Golgi network IDA
IDA: 通过直接分析推断
10749927 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

GGA3 蛋白结构

VHS

VHS: VHS domain (5 - 141)

  • 0
  • 100
  • 153 a.a.
蛋白主名 其他名称

ADP-ribosylation factor-binding protein GGA3

Golgi-localized, gamma ear-containing, ARF-binding protein 3

GGA3 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
GGA3 Q9NZ52 IGF2R Homo sapiens P11717
Imaging
16977309
种属内
GGA3 Q9NZ52 IGF2R Homo sapiens P11717
FPS
37100772
种属内
GGA3 Q9NZ52 PTGDR Homo sapiens Q13258
Anti Bait CoIP
32334026
种属内
GGA3 Q9NZ52 PTGDR Homo sapiens Q13258
IF
32334026
种属内
GGA3 Q9NZ52 PTGDR Homo sapiens Q13258
Anti Tag CoIP
32334026
种属内
GGA3 Q9NZ52 BACE1 Homo sapiens P56817
Anti Tag CoIP
26053850
种属内
GGA3 Q9NZ52 PACS1 Homo sapiens Q6VY07
Pull Down
16977309
种属内
GGA3 Q9NZ52 PACS1 Homo sapiens Q6VY07
Anti Tag CoIP
16977309
种属内
GGA3 Q9NZ52 M6PR Homo sapiens P20645
FPS
37100772
种属内
GGA3 Q9NZ52 M6PR Homo sapiens P20645
Y2H
11387475
种属内
GGA3 Q9NZ52 RABEP1 Homo sapiens Q15276
Y2H
12505986
种属内
GGA3 Q9NZ52 RABEP1 Homo sapiens Q15276
Anti Tag CoIP
12505986
种属内
GGA3 Q9NZ52 RABEP1 Homo sapiens Q15276
FPS
37100772
种属内
GGA3 Q9NZ52 GGA1 Homo sapiens Q9UJY5
Pull Down
14638859
种属内
GGA3 Q9NZ52 GGA2 Homo sapiens Q9UJY4
EM
14638859
种属内
GGA3 Q9NZ52 GGA2 Homo sapiens Q9UJY4
Pull Down
14638859
种属内
GGA3 Q9NZ52 ARF6 Homo sapiens P62330
Pull Down
24056087
种属内
GGA3 Q9NZ52 ARF6 Homo sapiens P62330
Pull Down
23143332
种属间
GGA3 Q9NZ52 NP Zaire ebolavirus P18272
FPS
37100772
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Nephrotic Syndrome, Type 17

NPHS17

Nephrotic Syndrome Type 17

Nephrotic Syndrome 17

Dyschromatosis Universalis Hereditaria

Duh

Periventricular Nodular Heterotopia

Periventricular Heterotopia

Pvnh

Familial Nodular Heterotopia

Heterotopia, Periventricular

Periventricular Heterotopia, X-Linked

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Canis familiaris GGA3 VGNC VGNC:41195
Rattus norvegicus GGA3 RGD RGD:1309553
Bos taurus GGA3 VGNC VGNC:29337
Felis catus GGA3 VGNC VGNC:62534
Macaca mulatta GGA3 VGNC VGNC:72733
Mus musculus GGA3 MGD MGI:2384159