1. Gene
  2. NEIL2 - nei like DNA glycosylase 2 Gene

NEIL2 - nei like DNA glycosylase 2 Gene

中文名称:nei 样 DNA 糖基化酶 2

种属: Homo sapiens

同用名: NEH2; NEI2

基因 ID: 252969 | 基因类型: protein coding

关于 NEIL2

Cytogenetic location: 8p23.1 Genomic coordinates (GRCh38): 8:11,769,710-11,787,345 (from NCBI)

This gene has 7 transcripts (splice variants), 114 orthologues and 2 paralogues. Ubiquitous expression in testis (RPKM 14.3), brain (RPKM 9.4) and 24 other tissues.

功能概要

该基因编码 DNA 糖基化酶 Fpg/Nei 家族的成员。这些糖基化酶通过切割氧化损伤的碱基并通过其脱碱基位点裂解酶活性引入 DNA 链断裂,从而启动碱基切除修复的第一步。这种酶主要与转录过程中的 DNA 修复有关,并且优先作用于胞嘧啶衍生的损伤,尤其是 5-羟基尿嘧啶和 5-羟基胞嘧啶。它包含一个 N 端催化结构域、一个铰链区和一个具有螺旋-双转角-螺旋和锌指基序的 C 端 DNA 结合结构域。这种酶与 X 射线交叉互补因子 1 支架蛋白相互作用,作为多蛋白 DNA 修复复合物的一部分。已鉴定出该基因的假基因。[RefSeq 提供,2017 年 3 月]

This gene encodes a member of the Fpg/Nei family of DNA glycosylases. These glycosylases initiate the first step in base excision repair by cleaving oxidatively damaged bases and introducing a DNA strand break via their abasic site lyase activity. This Enzyme is primarily associated with DNA repair during transcription and acts prefentially on cytosine-derived lesions, particularly 5-hydroxyuracil and 5-hydroxycytosine. It contains an N-terminal catalytic domain, a hinge region, and a C-terminal DNA-binding domain with helix-two-turn-helix and zinc finger motifs. This Enzyme interacts with the X-ray cross complementing factor 1 scaffold protein as part of a multi-protein DNA repair complex. A pseudogene of this gene has been identified. [provided by RefSeq, Mar 2017]

NEIL2 基因产物(8)

mRNA Protein Name
NM_001135746.3 NP_001129218.1 endonuclease 8-like 2 isoform a
NM_001135747.3 NP_001129219.1 endonuclease 8-like 2 isoform b
NM_001135748.3 NP_001129220.1 endonuclease 8-like 2 isoform c
NM_001349439.2 NP_001336368.1 endonuclease 8-like 2 isoform b
NM_001349440.2 NP_001336369.1 endonuclease 8-like 2 isoform b
NM_001349441.2 NP_001336370.1 endonuclease 8-like 2 isoform b
NM_001349442.2 NP_001336371.1 endonuclease 8-like 2 isoform a
NM_145043.4 NP_659480.1 endonuclease 8-like 2 isoform a
基因本体论
  • 分子功能
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
25416956 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

NEIL2 蛋白结构

Fapy_DNA_glyco

Fapy_DNA_glyco: Formamidopyrimidine-DNA glycosylase N-terminal domain (2 - 180)

H2TH

H2TH: Formamidopyrimidine-DNA glycosylase H2TH domain (210 - 269)

  • 0
  • 100
  • 200
  • 300
  • 332 a.a.
蛋白主名 其他名称

endonuclease 8-like 2

DNA glycosylase/AP lyase Neil2

NEIL2 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra NEIL2 Q969S2 REL Homo sapiens Q04864-2
Y2H Array
32296183
Intra NEIL2 Q969S2 REL Homo sapiens Q04864-2
Y2H Prey Pooling
32296183
Intra NEIL2 Q969S2 LCN2 Homo sapiens P80188
Y2H Prey Pooling
32296183
Intra NEIL2 Q969S2 LCN2 Homo sapiens P80188
Y2H Array
32296183
Intra NEIL2 Q969S2 CDHR3 Homo sapiens Q6ZTQ4
Y2H Array
32296183
Intra NEIL2 Q969S2 CDHR3 Homo sapiens Q6ZTQ4
Y2H Prey Pooling
32296183
Intra NEIL2 Q969S2 MEOX1 Homo sapiens P50221
Y2H Array
32296183
Intra NEIL2 Q969S2 MEOX1 Homo sapiens P50221
Validated Y2H
25416956
Intra NEIL2 Q969S2 MEOX1 Homo sapiens P50221
Y2H Prey Pooling
32296183
Intra NEIL2 Q969S2 MEOX1 Homo sapiens P50221
Y2H Array
25416956
Intra NEIL2 Q969S2 PAX5 Homo sapiens Q02548
Y2H Array
32296183
Intra NEIL2 Q969S2 PAX5 Homo sapiens Q02548
Y2H Prey Pooling
32296183
Intra NEIL2 Q969S2 REL Homo sapiens Q04864
Validated Y2H
25416956
Intra NEIL2 Q969S2 INCA1 Homo sapiens Q0VD86
Y2H Prey Pooling
32296183
Intra NEIL2 Q969S2 INCA1 Homo sapiens Q0VD86
Y2H Array
32296183
Intra NEIL2 Q969S2 TRIM27 Homo sapiens P14373
Y2H Array
25416956
Intra NEIL2 Q969S2 TRIM27 Homo sapiens P14373
Y2H Array
32296183
Intra NEIL2 Q969S2 TRIM27 Homo sapiens P14373
Validated Y2H
25416956
Intra NEIL2 Q969S2 TRIM27 Homo sapiens P14373
Y2H Prey Pooling
25416956
Intra NEIL2 Q969S2 TRIM27 Homo sapiens P14373
Y2H Prey Pooling
32296183
Intra NEIL2 Q969S2 CRX Homo sapiens O43186
Y2H Prey Pooling
32296183
Intra NEIL2 Q969S2 CRX Homo sapiens O43186
Y2H Array
32296183
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Autosomal Dominant Adult-Onset Proximal Spinal Muscular Atrophy

Autosomal Dominant Adult-Onset Proximal Sma

Autosomal Dominant Late-Onset Spinal Muscular Atrophy, Finkel Type

Finkel Disease

Smafk

Adult-Onset Proximal Spinal Muscular Atrophy, Autosomal Dominant

Autosomal Dominant Adult Proximal Spinal Muscular Atrophy

Finkel Late-Adult Type Sma

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Mus musculus NEIL2 MGD MGI:2686058
Bos taurus NEIL2 VGNC VGNC:31989
Canis familiaris NEIL2 VGNC VGNC:43727
Rattus norvegicus NEIL2 RGD RGD:1312033
Macaca mulatta NEIL2 VGNC VGNC:75210
Felis catus NEIL2 VGNC VGNC:107353