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  2. GABPA - GA binding protein transcription factor subunit alpha Gene

GABPA - GA binding protein transcription factor subunit alpha Gene

中文名称:GA 结合蛋白转录因子亚基α

种属: Homo sapiens

同用名: NFT2; NRF2; NRF2A; E4TF1A; E4TF1-60; RCH04A07

基因 ID: 2551 | 基因类型: protein coding

关于 GABPA

Cytogenetic location: 21q21.3 Genomic coordinates (GRCh38): 21:25,734,972-25,772,460 (from NCBI)

This gene has 3 transcripts (splice variants), 214 orthologues and 28 paralogues. Ubiquitous expression in thyroid (RPKM 13.9), endometrium (RPKM 11.3) and 25 other tissues.

功能概要

该基因编码三个 GA 结合蛋白转录因子亚基之一,该亚基起 DNA 结合亚基的作用。由于该亚基与编码核呼吸因子 2 基因的亚基具有同一性,因此它可能参与细胞色素氧化酶表达的激活和线粒体功能的核控制。该亚基还与构成转录因子 E4TF1 的亚基相同,后者负责腺病毒 E4 基因的表达。由于其染色体定位和与其他多肽形成异二聚体的能力,该基因可能在唐氏综合症表型中发挥作用。已发现该基因编码相同蛋白质的两个转录变体。[RefSeq 提供,2010 年 10 月]

This gene encodes one of three GA-binding protein transcription factor subunits which functions as a DNA-binding subunit. Since this subunit shares identity with a subunit encoding the nuclear respiratory factor 2 gene, it is likely involved in activation of cytochrome oxidase expression and nuclear control of mitochondrial function. This subunit also shares identity with a subunit constituting the transcription factor E4TF1, responsible for expression of the adenovirus E4 gene. Because of its chromosomal localization and ability to form heterodimers with Other polypeptides, this gene may play a role in the Down Syndrome phenotype. Two transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Oct 2010]

GABPA 基因产物(2)

mRNA Protein Name
NM_001197297.2 NP_001184226.1 GA-binding protein alpha chain
NM_002040.4 NP_002031.2 GA-binding protein alpha chain
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables DNA-binding transcription activator activity, RNA polymerase II-specific IDA
IDA: 通过直接分析推断
12750007 GOA
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IDA
IDA: 通过直接分析推断
12750007 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
10675337 GOA
enables sequence-specific double-stranded DNA binding IDA
IDA: 通过直接分析推断
28473536 GOA
enables transcription cis-regulatory region binding IDA
IDA: 通过直接分析推断
9857059 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
acts upstream of or within positive regulation of transcription by RNA polymerase II IDA
IDA: 通过直接分析推断
9857059 GOA
involved in positive regulation of transcription by RNA polymerase II IDA
IDA: 通过直接分析推断
12750007 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in chromatin IDA
IDA: 通过直接分析推断
22306510 GOA
located in nucleus IDA
IDA: 通过直接分析推断
9857059 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

GABPA 蛋白结构

GABP-alpha

GABP-alpha: GA-binding protein alpha chain (35 - 122)

SAM_PNT

SAM_PNT: Sterile alpha motif (SAM)/Pointed domain (171 - 250)

Ets

Ets: Ets-domain (319 - 401)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 454 a.a.
蛋白主名 其他名称

GA-binding protein alpha chain

GA binding protein transcription factor alpha subunit 60kDa

GABPA 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
GABPA Q06546 ZC2HC1B Homo sapiens Q5TFG8 32296183
种属内
GABPA Q06546 ZC2HC1B Homo sapiens Q5TFG8 32296183
种属内
GABPA Q06546 ZC2HC1B Homo sapiens Q5TFG8 32296183
种属内
GABPA Q06546 GABPB1 Homo sapiens Q06547 33961781
种属内
GABPA Q06546 GABPB1 Homo sapiens Q06547 32296183
种属内
GABPA Q06546 STK16 Homo sapiens O75716 32296183
种属内
GABPA Q06546 STK16 Homo sapiens O75716 32296183
种属内
GABPA Q06546 GABPB2 Homo sapiens Q8TAK5 32296183
种属内
GABPA Q06546 GABPB2 Homo sapiens Q8TAK5 33961781
种属间: 跨种属相互作用 种属内: 同种属相互作用

直系同源

种属 基因名 来源 基因 ID
Canis familiaris GABPA VGNC VGNC:41050
Mus musculus GABPA MGD MGI:95610
Rattus norvegicus GABPA RGD RGD:1310802
Bos taurus GABPA VGNC VGNC:29189
Macaca mulatta GABPA VGNC VGNC:72844
Felis catus GABPA VGNC VGNC:62416