1. Gene
  2. IFIT1 - interferon induced protein with tetratricopeptide repeats 1 Gene

IFIT1 - interferon induced protein with tetratricopeptide repeats 1 Gene

中文名称:干扰素诱导蛋白与四肽重复 1

种属: Homo sapiens

同用名: C56; P56; G10P1; IFI56; ISG56; IFI-56; IFIT-1; IFNAI1; RNM561; IFI-56K

基因 ID: 3434 | 基因类型: protein coding

关于 IFIT1

Cytogenetic location: 10q23.31 Genomic coordinates (GRCh38): 10:89,392,623-89,406,487 (from NCBI)

This gene has 2 transcripts (splice variants), 513 orthologues and 4 paralogues. Ubiquitous expression in adrenal (RPKM 10.7), spleen (RPKM 10.7) and 25 other tissues.

功能概要

该基因编码一种含有四肽重复序列的蛋白质,最初被鉴定为在干扰素处理后被诱导产生。编码的蛋白质可以抑制病毒复制和翻译起始。该基因与其他五个密切相关的基因位于 10 号染色体上的一个簇中。该基因在 13 号染色体上有一个假基因。已经观察到编码多种亚型的可变剪接转录物变体。[RefSeq 提供,2012 年 8 月]

This gene encodes a protein containing tetratricopeptide repeats that was originally identified as induced upon treatment with interferon. The encoded protein may inhibit viral replication and translational initiation. This gene is located in a cluster on chromosome 10 with five Other closely related genes. There is a pseudogene for this gene on chromosome 13. Alternatively spliced transcript variants encoding multiple isoforms have been observed. [provided by RefSeq, Aug 2012]

IFIT1 基因产物(5)

mRNA Protein Name
NM_001270927.2 NP_001257856.1 interferon-induced protein with tetratricopeptide repeats 1 isoform 2
NM_001270928.2 NP_001257857.1 interferon-induced protein with tetratricopeptide repeats 1 isoform 3
NM_001270929.2 NP_001257858.1 interferon-induced protein with tetratricopeptide repeats 1 isoform 3
NM_001270930.2 NP_001257859.1 interferon-induced protein with tetratricopeptide repeats 1 isoform 3
NM_001548.5 NP_001539.3 interferon-induced protein with tetratricopeptide repeats 1 isoform 1
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables RNA binding IDA
IDA: 通过直接分析推断
21642987 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
16189514 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in antiviral innate immune response IDA
IDA: 通过直接分析推断
19008854 GOA
involved in antiviral innate immune response IEP
IEP: 通过表达模式推断
25930096 GOA
involved in cellular response to exogenous dsRNA IDA
IDA: 通过直接分析推断
19008854 GOA
involved in cellular response to type I interferon IDA
IDA: 通过直接分析推断
19008854 GOA
involved in intracellular transport of viral protein in host cell IDA
IDA: 通过直接分析推断
19008854 GOA
involved in negative regulation of helicase activity IDA
IDA: 通过直接分析推断
19008854 GOA
involved in negative regulation of protein binding IDA
IDA: 通过直接分析推断
19416887 GOA
involved in negative regulation of viral genome replication IMP
IMP: 通过突变表型推断
19008854 GOA
involved in positive regulation of viral genome replication IDA
IDA: 通过直接分析推断
19416887 GOA
involved in response to virus IDA
IDA: 通过直接分析推断
19416887 GOA
involved in response to virus IMP
IMP: 通过突变表型推断
21642987 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in cytoplasm IDA
IDA: 通过直接分析推断
19008854 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

IFIT1 蛋白结构

TPR_12

TPR_12: Tetratricopeptide repeat (54 - 127)

TPR_1

TPR_1: Tetratricopeptide repeat (155 - 174)

TPR_2

TPR_2: Tetratricopeptide repeat (255 - 283)

TPR_1

TPR_1: Tetratricopeptide repeat (439 - 468)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 478 a.a.
蛋白主名 其他名称

interferon-induced protein with tetratricopeptide repeats 1

interferon, alpha-inducible protein (MW 56kD)

IFIT1 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
IFIT1 P09914 IFIT2 Homo sapiens P09913 21642987
种属间
IFIT1 P09914 E1 Human papillomavirus P06789 19008854
种属间
IFIT1 P09914 E1 Human papillomavirus P06789
IF
19008854
种属间
IFIT1 P09914 E1 Human papillomavirus P06789 19008854
种属内
IFIT1 P09914 IFIT3 Homo sapiens O14879
GMS
21642987
种属内
IFIT1 P09914 IFIT3 Homo sapiens O14879 25416956
种属内
IFIT1 P09914 IFIT3 Homo sapiens O14879 21642987
种属内
IFIT1 P09914 IFIT3 Homo sapiens O14879 27107012
种属内
IFIT1 P09914 IFIT3 Homo sapiens O14879 16189514
种属内
IFIT1 P09914 IFIT3 Homo sapiens O14879 27107012
种属间: 跨种属相互作用 种属内: 同种属相互作用

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