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  2. H2BC12 - H2B clustered histone 12 Gene

H2BC12 - H2B clustered histone 12 Gene

中文名称:H2B 成簇组蛋白 12

种属: Homo sapiens

同用名: H2BK; H2B/S; H2BFT; H2BFAiii; HIST1H2BK

基因 ID: 85236 | 基因类型: protein coding

关于 H2BC12

Cytogenetic location: 6p22.1 Genomic coordinates (GRCh38): 6:27,138,293-27,146,858 (from NCBI)

This gene has 1 transcript (splice variant), 164 orthologues and 21 paralogues. Ubiquitous expression in prostate (RPKM 42.3), testis (RPKM 29.8) and 25 other tissues.

功能概要

组蛋白是基本的核蛋白,负责真核生物染色体纤维的核小体结构。四个核心组蛋白 (H2A、H2B、H3 和 H4) 中的每一个的两个分子形成一个八聚体,大约 146 bp 的 DNA 被包裹在称为核小体的重复单元中。接头组蛋白 H1 与核小体之间的接头 DNA 相互作用,并在将染色质压缩成更高级结构中发挥作用。该基因编码复制依赖组蛋白,该组蛋白是组蛋白 H2B 家族的成员。所编码的蛋白质是一种具有抗菌和抗真菌活性的抗菌蛋白。已为该基因鉴定出编码相同蛋白质的两个转录本,该基因位于染色体 6p21.33 上的组蛋白微簇中。[RefSeq 提供,2015 年 8 月]

Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene encodes a replication-dependent histone that is a member of the histone H2B family. The protein encoded is an antimicrobial protein with Antibacterial and Antifungal activity. Two transcripts that encode the same protein have been identified for this gene, which is found in the histone microcluster on chromosome 6p21.33. [provided by RefSeq, Aug 2015]

H2BC12 基因产物(2)

mRNA Protein Name
NM_001312653.2 NP_001299582.1 histone H2B type 1-K
NM_080593.2 NP_542160.1 histone H2B type 1-K
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
31759698 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in antibacterial humoral response IDA
IDA: 通过直接分析推断
12860195 GOA
involved in antimicrobial humoral immune response mediated by antimicrobial peptide IDA
IDA: 通过直接分析推断
12860195 GOA
involved in defense response to Gram-negative bacterium IDA
IDA: 通过直接分析推断
15019208 GOA
involved in defense response to Gram-positive bacterium IDA
IDA: 通过直接分析推断
12860195 GOA
involved in innate immune response in mucosa IDA
IDA: 通过直接分析推断
12860195 GOA
involved in killing of cells of another organism IDA
IDA: 通过直接分析推断
15019208 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in extracellular space IDA
IDA: 通过直接分析推断
12860195 GOA
located in nucleus IDA
IDA: 通过直接分析推断
16319397 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

H2BC12 蛋白结构

Histone

Histone: Core histone H2A/H2B/H3/H4 (32 - 101)

  • 0
  • 100
  • 126 a.a.
蛋白主名 其他名称

histone H2B type 1-K

H2B K

H2BC12 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Cross H2BC12 O60814 LANA1 Human herpesvirus 8 Q9QR71
Crosslink
31759698
Intra H2BC12 O60814 SMARCB1 Homo sapiens Q12824
Competition Binding
31759698
Intra H2BC12 O60814 SMARCB1 Homo sapiens Q12824
Crosslink
31759698
种属间: 跨种属相互作用 种属内: 同种属相互作用

直系同源

种属 基因名 来源 基因 ID
Mus musculus H2BC12 MGD MGI:2448399
Macaca mulatta H2BC12 VGNC VGNC:109709
Rattus norvegicus H2BC12 RGD RGD:1593016