1. Gene
  2. DHX9 - DExH-box helicase 9 Gene

DHX9 - DExH-box helicase 9 Gene

中文名称:DExH-box 解旋酶 9

种属: Homo sapiens

同用名: LKP; RHA; DDX9; NDH2; NDHII

基因 ID: 1660 | 基因类型: protein coding

关于 DHX9

Cytogenetic location: 1q25.3 Genomic coordinates (GRCh38): 1:182,839,347-182,887,982 (from NCBI)

This gene has 8 transcripts (splice variants), 199 orthologues and 18 paralogues. Ubiquitous expression in bone marrow (RPKM 54.5), testis (RPKM 36.3) and 25 other tissues.

功能概要

该基因编码含有 DEAH 的 RNA 解旋酶家族成员。编码的蛋白质是一种酶,可催化双链 RNA 和 DNA-RNA 复合物的 ATP 依赖性解旋。该蛋白质定位于细胞核和细胞质,并作为转录调节因子发挥作用。这种蛋白质也可能参与逆转录病毒 RNA 的表达和核输出。交替剪接导致多个转录本变体。该基因的假基因存在于 11 号和 13 号染色体上。[RefSeq 提供,2010 年 2 月]

This gene encodes a member of the DEAH-containing family of RNA helicases. The encoded protein is an Enzyme that catalyzes the ATP-dependent unwinding of double-stranded RNA and DNA-RNA complexes. This protein localizes to both the nucleus and the cytoplasm and functions as a transcriptional regulator. This protein may also be involved in the expression and nuclear export of retroviral RNAs. Alternate splicing results in multiple transcript variants. Pseudogenes of this gene are found on chromosomes 11 and 13.[provided by RefSeq, Feb 2010]

DHX9 基因产物(1)

mRNA Protein Name
NM_001357.5 NP_001348.2 ATP-dependent RNA helicase A
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables 3'-5' DNA helicase activity IDA
IDA: 通过直接分析推断
21561811 GOA
enables 3'-5' DNA/RNA helicase activity IDA
IDA: 通过直接分析推断
1537828 GOA
enables 3'-5' RNA helicase activity IDA
IDA: 通过直接分析推断
1537828 GOA
enables ATP binding IDA
IDA: 通过直接分析推断
11416126 GOA
enables ATP hydrolysis activity IMP
IMP: 通过突变表型推断
11416126 GOA
enables DNA helicase activity IMP
IMP: 通过突变表型推断
12711669 GOA
enables DNA replication origin binding IDA
IDA: 通过直接分析推断
24990949 GOA
enables RISC complex binding IDA
IDA: 通过直接分析推断
17531811 GOA
enables RNA binding IDA
IDA: 通过直接分析推断
1537828 GOA
enables RNA helicase activity IDA
IDA: 通过直接分析推断
28221134 GOA
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IDA
IDA: 通过直接分析推断
11038348 GOA
enables RNA polymerase II complex binding IDA
IDA: 通过直接分析推断
11416126 GOA
enables RNA polymerase II-specific DNA-binding transcription factor binding IPI
IPI: 通过物理相互作用推断
17303075 GOA
enables RNA polymerase binding IDA
IDA: 通过直接分析推断
9323138 GOA
enables RNA stem-loop binding IDA
IDA: 通过直接分析推断
11096080 GOA
enables chromatin DNA binding IDA
IDA: 通过直接分析推断
24049074 GOA
enables double-stranded DNA binding IDA
IDA: 通过直接分析推断
9111062 GOA
enables double-stranded RNA binding IDA
IDA: 通过直接分析推断
9111062 GOA
enables importin-alpha family protein binding IDA
IDA: 通过直接分析推断
16375861 GOA
enables mRNA binding IDA
IDA: 通过直接分析推断
10198287 GOA
enables mRNA binding IMP
IMP: 通过突变表型推断
28221134 GOA
enables nucleoside triphosphate diphosphatase activity IDA
IDA: 通过直接分析推断
1537828 GOA
enables promoter-specific chromatin binding IMP
IMP: 通过突变表型推断
28221134 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
9323138 GOA
enables regulatory region RNA binding IDA
IDA: 通过直接分析推断
28355180 GOA
enables ribosome binding IDA
IDA: 通过直接分析推断
16680162 GOA
enables sequence-specific mRNA binding IDA
IDA: 通过直接分析推断
9162007 GOA
enables siRNA binding IDA
IDA: 通过直接分析推断
23361462 GOA
enables single-stranded 3'-5' DNA helicase activity IDA
IDA: 通过直接分析推断
20669935 GOA
enables single-stranded DNA binding IDA
IDA: 通过直接分析推断
9111062 GOA
enables single-stranded RNA binding IDA
IDA: 通过直接分析推断
9111062 GOA
enables transcription coactivator activity IMP
IMP: 通过突变表型推断
9323138 GOA
enables transcription coregulator activity IMP
IMP: 通过突变表型推断
11416126 GOA
enables triplex DNA binding IDA
IDA: 通过直接分析推断
24049074 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in CRD-mediated mRNA stabilization IDA
IDA: 通过直接分析推断
19029303 GOA
involved in CRD-mediated mRNA stabilization IMP
IMP: 通过突变表型推断
19029303 GOA
involved in DNA duplex unwinding IDA
IDA: 通过直接分析推断
9111062 GOA
involved in DNA duplex unwinding IMP
IMP: 通过突变表型推断
12711669 GOA
involved in DNA-templated viral transcription IDA
IDA: 通过直接分析推断
11096080 GOA
involved in G-quadruplex DNA unwinding IDA
IDA: 通过直接分析推断
21561811 GOA
involved in RISC complex assembly IMP
IMP: 通过突变表型推断
17531811 GOA
involved in RNA secondary structure unwinding IDA
IDA: 通过直接分析推断
1537828 GOA
involved in alternative mRNA splicing, via spliceosome IMP
IMP: 通过突变表型推断
28221134 GOA
involved in cellular response to exogenous dsRNA IMP
IMP: 通过突变表型推断
21957149 GOA
involved in cellular response to tumor necrosis factor IMP
IMP: 通过突变表型推断
15355351 GOA
involved in miRNA-mediated post-transcriptional gene silencing IMP
IMP: 通过突变表型推断
17531811 GOA
involved in negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IDA
IDA: 通过直接分析推断
19029303 GOA
involved in positive regulation of DNA repair IMP
IMP: 通过突变表型推断
24049074 GOA
involved in positive regulation of DNA replication IMP
IMP: 通过突变表型推断
24990949 GOA
involved in positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity IMP
IMP: 通过突变表型推断
12711669 GOA
involved in positive regulation of NF-kappaB transcription factor activity IMP
IMP: 通过突变表型推断
15355351 GOA
involved in positive regulation of RNA export from nucleus IDA
IDA: 通过直接分析推断
11402034 GOA
involved in positive regulation of cytoplasmic translation IDA
IDA: 通过直接分析推断
19029303 GOA
involved in positive regulation of cytoplasmic translation IMP
IMP: 通过突变表型推断
16680162 GOA
involved in positive regulation of fibroblast proliferation IMP
IMP: 通过突变表型推断
24990949 GOA
involved in positive regulation of interferon-alpha production IMP
IMP: 通过突变表型推断
21957149 GOA
involved in positive regulation of interferon-beta production IMP
IMP: 通过突变表型推断
21957149 GOA
involved in positive regulation of interleukin-6 production IMP
IMP: 通过突变表型推断
20696886 GOA
involved in positive regulation of response to cytokine stimulus IMP
IMP: 通过突变表型推断
21957149 GOA
involved in positive regulation of transcription by RNA polymerase II IMP
IMP: 通过突变表型推断
9323138 GOA
involved in positive regulation of tumor necrosis factor production IMP
IMP: 通过突变表型推断
20696886 GOA
involved in positive regulation of viral transcription IDA
IDA: 通过直接分析推断
11096080 GOA
involved in protein localization to cytoplasmic stress granule IMP
IMP: 通过突变表型推断
24965446 GOA
involved in protein-containing complex assembly IDA
IDA: 通过直接分析推断
23361462 GOA
involved in regulation of cytoplasmic translation IDA
IDA: 通过直接分析推断
28355180 GOA
involved in regulation of mRNA processing IDA
IDA: 通过直接分析推断
28355180 GOA
involved in regulation of transcription by RNA polymerase II IMP
IMP: 通过突变表型推断
9662397 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of CRD-mediated mRNA stability complex IDA
IDA: 通过直接分析推断
19029303 GOA
part of CRD-mediated mRNA stability complex IPI
IPI: 通过物理相互作用推断
19029303 GOA
part of RISC complex IDA
IDA: 通过直接分析推断
17531811 GOA
part of RISC-loading complex IMP
IMP: 通过突变表型推断
17531811 GOA
located in actin cytoskeleton IDA
IDA: 通过直接分析推断
11687588 GOA
located in centrosome IDA
IDA: 通过直接分析推断
17498979 GOA
located in cytoplasm IDA
IDA: 通过直接分析推断
9162007 GOA
located in cytoplasmic ribonucleoprotein granule IDA
IDA: 通过直接分析推断
10198287 GOA
located in cytosol IDA
IDA: 通过直接分析推断
19029303 GOA
located in nuclear body IDA
IDA: 通过直接分析推断
28221134 GOA
located in nuclear stress granule IDA
IDA: 通过直接分析推断
10198287 GOA
located in nuclear stress granule IMP
IMP: 通过突变表型推断
24965446 GOA
located in nucleoplasm IDA
IDA: 通过直接分析推断
28221134 GOA
located in nucleus IDA
IDA: 通过直接分析推断
9162007 GOA
located in perichromatin fibrils IDA
IDA: 通过直接分析推断
10198287 GOA
part of protein-containing complex IDA
IDA: 通过直接分析推断
11687588 GOA
part of ribonucleoprotein complex IDA
IDA: 通过直接分析推断
11402034 GOA
part of ribonucleoprotein complex IMP
IMP: 通过突变表型推断
28221134 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

DHX9 蛋白结构

dsrm

dsrm: Double-stranded RNA binding motif (5 - 69)

dsrm

dsrm: Double-stranded RNA binding motif (181 - 250)

DEAD

DEAD: DEAD/DEAH box helicase (394 - 547)

Helicase_C

Helicase_C: Helicase conserved C-terminal domain (680 - 768)

HA2

HA2: Helicase associated domain (HA2) (831 - 919)

OB_NTP_bind

OB_NTP_bind: Oligonucleotide/oligosaccharide-binding (OB)-fold (959 - 1072)

  • 0
  • 200
  • 400
  • 600
  • 800
  • 1000
  • 1200
  • 1270 a.a.
蛋白主名 其他名称

ATP-dependent RNA helicase A

DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 9

DHX9 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra DHX9 Q08211 HNRNPA2B1 Homo sapiens P22626
Anti Bait CoIP
18519039
Intra DHX9 Q08211 HNRNPA2B1 Homo sapiens P22626
Anti Tag CoIP
35271311
Intra DHX9 Q08211 YBX1 Homo sapiens P67809
Anti Bait CoIP
21849455
Intra DHX9 Q08211 YBX1 Homo sapiens P67809
Anti Tag CoIP
35271311
Intra DHX9 Q08211 YBX1 Homo sapiens P67809
Anti Bait CoIP
23986595
Intra DHX9 Q08211 XPO1 Homo sapiens O14980
Anti Bait CoIP
19955415
Intra DHX9 Q08211 NXF1 Homo sapiens Q9UBU9
Anti Bait CoIP
10924507
Intra DHX9 Q08211 EIF2AK2 Homo sapiens P19525
Anti Tag CoIP
35271311
Intra DHX9 Q08211 RELA Homo sapiens Q04206
CoIP
15355351
Intra DHX9 Q08211 RELA Homo sapiens Q04206
Anti Tag CoIP
15355351
Intra DHX9 Q08211 RELA Homo sapiens Q04206
Pull Down
15355351
Intra DHX9 Q08211 PRMT1 Homo sapiens Q99873
Anti Tag CoIP
35271311
Intra DHX9 Q08211 PRMT1 Homo sapiens Q99873
Pull Down
15084609
Cross DHX9 Q08211 P19712-PRO_0000038050 Classical swine fever virus P19712-PRO_0000038050
Pull Down
24965446
Cross DHX9 Q08211 P19712-PRO_0000038050 Classical swine fever virus P19712-PRO_0000038050
IF
24965446
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Werner Syndrome

Werner'S Syndrome

WRN

Adult Progeria

Ws

Adult Premature Ageing Syndrome

Adult Premature Aging Syndrome

Werners Syndrome

Chikungunya

Chikungunya Fever

Arbovirus A Chikungunya Type

Chik

Chikv Infection

Ck

Chikungunya Virus Infection

Chikungunya Haemorrhagic Fever

Chikungunya Viral Disease

Chikungunya Mosquito-Borne Viral Fever

Parkinson Disease 22, Autosomal Dominant

PARK22

Parkinson'S Disease 22

Autosomal Dominant Parkinson'S Disease 22

Parkinson Disease 22

Abnormal Retinal Correspondence
Avian Influenza

Bird Flu

Influenza In Birds

Avian Flu

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Mus musculus DHX9 MGD MGI:108177
Bos taurus DHX9 VGNC VGNC:28060
Felis catus DHX9 VGNC VGNC:61488
Rattus norvegicus DHX9 RGD RGD:1308548
Macaca mulatta DHX9 VGNC VGNC:71766
Canis familiaris DHX9 VGNC VGNC:39953
Others DHX9 NCBI