1. Gene
  2. SNRPD3 - small nuclear ribonucleoprotein D3 polypeptide Gene

SNRPD3 - small nuclear ribonucleoprotein D3 polypeptide Gene

中文名称:小核核糖核蛋白 D3 多肽

种属: Homo sapiens

同用名: SMD3; Sm-D3

基因 ID: 6634 | 基因类型: protein coding

关于 SNRPD3

Cytogenetic location: 22q11.23 Genomic coordinates (GRCh38): 22:24,555,650-24,574,971 (from NCBI)

This gene has 3 transcripts (splice variants), 222 orthologues and 2 paralogues. Ubiquitous expression in thyroid (RPKM 22.3), prostate (RPKM 19.1) and 25 other tissues.

功能概要

该基因编码剪接体的核心成分,剪接体是一种核核糖核蛋白复合物,在 pre-mRNA 剪接中发挥作用。可变剪接导致多个转录本变体。[RefSeq 提供,2013 年 7 月]

This gene encodes a core component of the spliceosome, which is a nuclear ribonucleoprotein complex that functions in pre-mRNA splicing. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2013]

SNRPD3 基因产物(2)

mRNA Protein Name
NM_001278656.2 NP_001265585.1 small nuclear ribonucleoprotein Sm D3
NM_004175.5 NP_004166.1 small nuclear ribonucleoprotein Sm D3
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables RNA binding IPI
IPI: 通过物理相互作用推断
18082603 GOA
enables U7 snRNA binding IPI
IPI: 通过物理相互作用推断
18082603 GOA
enables enzyme binding IPI
IPI: 通过物理相互作用推断
17709427 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
10500148 GOA
enables telomerase RNA binding IPI
IPI: 通过物理相互作用推断
18082603 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in mRNA splicing, via spliceosome IDA
IDA: 通过直接分析推断
28076346 GOA
acts upstream of or within protein methylation IDA
IDA: 通过直接分析推断
18495660 GOA
involved in spliceosomal snRNP assembly IDA
IDA: 通过直接分析推断
18984161 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of SMN-Sm protein complex IDA
IDA: 通过直接分析推断
18984161 GOA
part of U1 snRNP IDA
IDA: 通过直接分析推断
21113136 GOA
part of U1 snRNP IPI
IPI: 通过物理相互作用推断
33677607 GOA
part of U12-type spliceosomal complex IDA
IDA: 通过直接分析推断
15146077 GOA
part of U2-type catalytic step 2 spliceosome IDA
IDA: 通过直接分析推断
28076346 GOA
part of U2-type precatalytic spliceosome IDA
IDA: 通过直接分析推断
28781166 GOA
part of U2-type spliceosomal complex IDA
IDA: 通过直接分析推断
32494006 GOA
part of U4 snRNP IDA
IDA: 通过直接分析推断
21516107 GOA
part of U4/U6 x U5 tri-snRNP complex IDA
IDA: 通过直接分析推断
26912367 GOA
part of U4/U6 x U5 tri-snRNP complex IPI
IPI: 通过物理相互作用推断
30975767 GOA
part of U7 snRNP IDA
IDA: 通过直接分析推断
11574479 GOA
part of catalytic step 2 spliceosome IDA
IDA: 通过直接分析推断
11991638 GOA
located in cytosol IDA
IDA: 通过直接分析推断
18984161 GOA
part of methylosome IDA
IDA: 通过直接分析推断
18984161 GOA
located in nucleus IDA
IDA: 通过直接分析推断
28076346 GOA
part of pICln-Sm protein complex IDA
IDA: 通过直接分析推断
18984161 GOA
part of spliceosomal complex IPI
IPI: 通过物理相互作用推断
33677607 GOA
part of telomerase holoenzyme complex IDA
IDA: 通过直接分析推断
18082603 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

SNRPD3 蛋白结构

LSM

LSM: LSM domain (10 - 73)

  • 0
  • 100
  • 126 a.a.
蛋白主名 其他名称

small nuclear ribonucleoprotein Sm D3

small nuclear ribonucleoprotein D3 polypeptide 18kDa

SNRPD3 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
SNRPD3 P62318 SNRPB2 Homo sapiens P08579
Crosslink
30021884
种属内
SNRPD3 P62318 SF3A2 Homo sapiens Q15428
Affinity Chrom
17332742
种属内
SNRPD3 P62318 SF3A2 Homo sapiens Q15428
Anti Tag CoIP
33961781
种属内
SNRPD3 P62318 LSM3 Homo sapiens P62310
Y2H
22365833
种属内
SNRPD3 P62318 LSM7 Homo sapiens Q9UK45
Y2H
21988832
种属内
SNRPD3 P62318 LSM7 Homo sapiens Q9UK45
Y2H
22365833
种属内
SNRPD3 P62318 SNRPB Homo sapiens P14678
Y2H
22365833
种属内
SNRPD3 P62318 SRPK1 Homo sapiens Q96SB4
Anti Tag CoIP
33961781
种属内
SNRPD3 P62318 CLNS1A Homo sapiens P54105
Anti Tag CoIP
33961781
种属内
SNRPD3 P62318 CLNS1A Homo sapiens P54105
Y2H Array
32296183
种属内
SNRPD3 P62318 CLNS1A Homo sapiens P54105
Y2H Prey Pooling
32296183
种属内
SNRPD3 P62318 CLNS1A Homo sapiens P54105
Y2H
21988832
种属内
SNRPD3 P62318 NTAQ1 Homo sapiens Q96HA8
Validated Y2H
32296183
种属间: 跨种属相互作用 种属内: 同种属相互作用

SNRPD3 抗体

目录号 产品名 应用 反应物种
HY-P82281 SNRPD3 Antibody (YA2026) WB Human, Rat

关联疾病

疾病名称 别名
Mixed Connective Tissue Disease

Sharp Syndrome

Mctd

Connective Tissue Disease Overlap Syndrome

Mixed Collagen Vascular Disease

Mctd - [Mixed Connective Tissue Disease]

Lupus Erythematosus

Lupus

Lupus Vulgaris

Lupus Erythematosus, Discoid

Lupus Erythematosus, Systemic

Subacute Cutaneous Lupus

Le - [Lupus Erythematosus]

Spinal Muscular Atrophy

Sma

5q Sma

Proximal Sma

Sma-Associated Sma

Spinal Amyotrophies

Spinal Amyotrophy

Spinal Muscle Degeneration

Spinal Muscle Wasting

Muscular Atrophy Spinal

Atrophy, Muscular, Spinal

Hereditary Motor Neuronopathy

Progressive Muscular Atrophy

Sma - [Spinal Muscular Atrophy]

Muscular Atrophy

Muscle Wasting

Amyotrophia

Wasting - Muscle

Skeletal Muscle Atrophy

Connective Tissue Disease

Connective Tissue Diseases

Connective Tissue Disorder

Abnormality Of Connective Tissue

Disorder Of Connective Tissue

Connective Tissue Disorders

Systemic Lupus Erythematosus

Lupus Nephritis

SLE

Disseminated Lupus Erythematosus

Systemic Lupus Erythematosus, Susceptibility To

Lupus Erythematosus, Systemic

Lupus Nephritis, Susceptibility To

Libman-Sacks Disease

Systemic Lupus Erythematosus Susceptibility To

Sle - Lupus Erythematosus, Systemic

Le Syndrome

Lupus

Lupus Erythematosus Systemic

Lupus Erythematosus, Systemic, Susceptibility To

Lupus Vulgaris

Lupus Erythematosus, Discoid

Lupus Erythematosus

Systemic Lupus Erythematosus Nos

Sle - [Systemic Lupus Erythematosus]

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Mus musculus SNRPD3 MGD MGI:1914582
Rattus norvegicus SNRPD3 RGD RGD:1597573
Bos taurus SNRPD3 VGNC VGNC:35080
Felis catus SNRPD3 VGNC VGNC:80491
Macaca mulatta SNRPD3 VGNC VGNC:77678