1. Gene
  2. DDX17 - DEAD-box helicase 17 Gene

DDX17 - DEAD-box helicase 17 Gene

中文名称:死盒解旋酶 17

种属: Homo sapiens

同用名: P72; RH70

基因 ID: 10521 | 基因类型: protein coding

关于 DDX17

Cytogenetic location: 22q13.1 Genomic coordinates (GRCh38): 22:38,483,438-38,506,311 (from NCBI)

This gene has 10 transcripts (splice variants), 167 orthologues and 38 paralogues. Ubiquitous expression in spleen (RPKM 144.6), endometrium (RPKM 136.4) and 25 other tissues.

功能概要

以保守基序 Asp-Glu-Ala-Asp (DEAD) 为特征的 DEAD 盒蛋白是推定的 RNA 解旋酶。它们涉及许多涉及 RNA 二级结构改变的细胞过程,例如翻译起始、核和线粒体剪接以及核糖体和剪接体组装。根据它们的分布模式,该家族的一些成员被认为参与了胚胎发生、精子发生以及细胞生长和分裂。该基因编码一个 DEAD box 蛋白,它是一种被多种 RNA 激活的 ATP 酶,但不被 dsDNA 激活。这种蛋白质以及由 DDX5 基因编码的蛋白质彼此之间的关系比与 DEAD 盒家族的任何其他成员之间的关系更为密切。由于选择性剪接和使用替代翻译起始密码子,包括非 AUG (CUG) 起始密码子,该基因可以编码多种亚型。[RefSeq 提供,2011 年 4 月]

DEAD box proteins, characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. They are implicated in a number of cellular processes involving alteration of RNA secondary structure, such as translation initiation, nuclear and mitochondrial splicing, and ribosome and splicesosome assembly. Based on their distribution patterns, some members of this family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. This gene encodes a DEAD box protein, which is an ATPase activated by a variety of RNA species, but not by dsDNA. This protein, and that encoded by DDX5 gene, are more closely related to each other than to any other member of the DEAD box family. This gene can encode multiple isoforms due to both alternative splicing and the use of alternative translation initiation codons, including a non-AUG (CUG) start codon. [provided by RefSeq, Apr 2011]

DDX17 基因产物(2)

mRNA Protein Name
NM_001098504.2 NP_001091974.1 probable ATP-dependent RNA helicase DDX17 isoform 3
NM_006386.5 NP_006377.2 probable ATP-dependent RNA helicase DDX17 isoform 1
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
14559993 GOA
enables transcription coactivator activity IDA
IDA: 通过直接分析推断
17226766 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in nucleus IDA
IDA: 通过直接分析推断
24910439 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

DDX17 蛋白结构

DEAD

DEAD: DEAD/DEAH box helicase (195 - 365)

Helicase_C

Helicase_C: Helicase conserved C-terminal domain (438 - 512)

  • 0
  • 200
  • 400
  • 600
  • 729 a.a.
蛋白主名 其他名称

probable ATP-dependent RNA helicase DDX17

DEAD (Asp-Glu-Ala-Asp) box helicase 17

DDX17 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra DDX17 Q92841 YAP1 Homo sapiens P46937
Anti Bait CoIP
24581491
Intra DDX17 Q92841 YAP1 Homo sapiens P46937
GMS
24581491
Intra DDX17 Q92841 YAP1 Homo sapiens P46937
Anti Tag CoIP
24581491
Intra DDX17 Q92841 RBM15 Homo sapiens Q96T37
Validated Y2H
25416956
Intra DDX17 Q92841 NFAT5 Homo sapiens O94916
Anti Tag CoIP
22266867
Intra DDX17 Q92841 DDX5 Homo sapiens P17844
Anti Tag CoIP
33961781
Intra DDX17 Q92841 DDX5 Homo sapiens P17844
Anti Tag CoIP
24581491
Intra DDX17 Q92841 BYSL Homo sapiens Q13895
Validated Y2H
25416956
Intra DDX17 Q92841 BYSL Homo sapiens Q13895
Y2H Prey Pooling
25416956
Intra DDX17 Q92841 TP53 Homo sapiens P04637
Anti Bait CoIP
15660129
Intra DDX17 Q92841 EXOSC3 Homo sapiens Q9NQT5
Anti Bait CoIP
18334637
Intra DDX17 Q92841 GRB2 Homo sapiens P62993
Y2H Array
25416956
Intra DDX17 Q92841 GRB2 Homo sapiens P62993
Y2H Prey Pooling
25416956
Intra DDX17 Q92841 LNX1 Homo sapiens Q8TBB1
Y2H Array
32296183
Intra DDX17 Q92841 LNX1 Homo sapiens Q8TBB1
Y2H Pooling
16189514
Intra DDX17 Q92841 SF1 Homo sapiens Q15637
Y2H Fragment Pooling
26420826
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Rift Valley Fever

Rfv - [Rift Valley Fever]

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Macaca mulatta DDX17 VGNC VGNC:71762
Felis catus DDX17 VGNC VGNC:61398
Bos taurus DDX17 VGNC VGNC:27957
Mus musculus DDX17 MGD MGI:1914290
Canis familiaris DDX17 VGNC VGNC:39846
Rattus norvegicus DDX17 RGD RGD:1304945