1. Gene
  2. DDX5 - DEAD-box helicase 5 Gene

DDX5 - DEAD-box helicase 5 Gene

中文名称:死盒解旋酶 5

种属: Homo sapiens

同用名: p68; HLR1; G17P1; HUMP68

基因 ID: 1655 | 基因类型: protein coding

关于 DDX5

Cytogenetic location: 17q23.3 Genomic coordinates (GRCh38): 17:64,498,254-64,506,866 (from NCBI)

This gene has 41 transcripts (splice variants), 275 orthologues, 38 paralogues and is associated with 48 phenotypes. Ubiquitous expression in bone marrow (RPKM 190.1), lymph node (RPKM 152.4) and 25 other tissues.

功能概要

该基因编码 RNA 解旋酶 DEAD 盒家族的成员,由于其作为衔接分子的作用,参与多种细胞过程,促进与大量其他因素的相互作用。这种蛋白质参与包括 RNA 结构改变在内的途径,作为转录的核心调节因子、剪接调节因子以及小的非编码 RNA 的加工发挥作用。这个家族的成员包含九个保守基序,包括保守的 Asp-Glu-Ala-Asp (DEAD) 基序,对 ATP 结合和水解以及 RNA 结合和解旋活动很重要。该基因的失调可能在癌症发展中发挥作用。可变剪接导致多个转录本变体。[RefSeq 提供,2017 年 9 月]

This gene encodes a member of the DEAD box family of RNA helicases that are involved in a variety of cellular processes as a result of its role as an adaptor molecule, promoting interactions with a large number of other factors. This protein is involved in pathways that include the alteration of RNA structures, plays a role as a coregulator of transcription, a regulator of splicing, and in the processing of small noncoding RNAs. Members of this family contain nine conserved motifs, including the conserved Asp-Glu-Ala-Asp (DEAD) motif, important to ATP binding and hydrolysis as well as RNA binding and unwinding activities. Dysregulation of this gene may play a role in Cancer development. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Sep 2017]

DDX5 基因产物(4)

mRNA Protein Name
NM_001320595.2 NP_001307524.1 probable ATP-dependent RNA helicase DDX5 isoform a
NM_001320596.3 NP_001307525.1 probable ATP-dependent RNA helicase DDX5 isoform a
NM_001320597.2 NP_001307526.1 probable ATP-dependent RNA helicase DDX5 isoform b
NM_004396.5 NP_004387.1 probable ATP-dependent RNA helicase DDX5 isoform a
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables MH2 domain binding IPI
IPI: 通过物理相互作用推断
18548003 GOA
enables R-SMAD binding IPI
IPI: 通过物理相互作用推断
18548003 GOA
enables RNA helicase activity IMP
IMP: 通过突变表型推断
21343338 GOA
enables SMAD binding IPI
IPI: 通过物理相互作用推断
18548003 GOA
enables mRNA 3'-UTR binding IDA
IDA: 通过直接分析推断
23788676 GOA
enables nuclear androgen receptor binding IDA
IDA: 通过直接分析推断
18829551 GOA
enables pre-mRNA binding IDA
IDA: 通过直接分析推断
21343338 GOA
enables primary miRNA binding IDA
IDA: 通过直接分析推断
18548003 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
10837141 GOA
enables ribonucleoprotein complex binding IDA
IDA: 通过直接分析推断
23788676 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in BMP signaling pathway IMP
IMP: 通过突变表型推断
18548003 GOA
involved in alternative mRNA splicing, via spliceosome IMP
IMP: 通过突变表型推断
24275493 GOA
involved in androgen receptor signaling pathway IMP
IMP: 通过突变表型推断
24275493 GOA
involved in epithelial to mesenchymal transition IMP
IMP: 通过突变表型推断
24910439 GOA
involved in estrogen receptor signaling pathway IMP
IMP: 通过突变表型推断
24275493 GOA
involved in intrinsic apoptotic signaling pathway by p53 class mediator IMP
IMP: 通过突变表型推断
15660129 GOA
involved in mRNA transcription IMP
IMP: 通过突变表型推断
23143267 GOA
involved in negative regulation of transcription by RNA polymerase II IDA
IDA: 通过直接分析推断
15298701 GOA
involved in nuclear-transcribed mRNA catabolic process IDA
IDA: 通过直接分析推断
23788676 GOA
involved in positive regulation of DNA damage response, signal transduction by p53 class mediator IMP
IMP: 通过突变表型推断
15660129 GOA
involved in primary miRNA processing IMP
IMP: 通过突变表型推断
18548003 GOA
involved in regulation of alternative mRNA splicing, via spliceosome IDA
IDA: 通过直接分析推断
21343338 GOA
involved in regulation of alternative mRNA splicing, via spliceosome IMP
IMP: 通过突变表型推断
23022728 GOA
involved in regulation of androgen receptor signaling pathway IMP
IMP: 通过突变表型推断
18829551 GOA
NOT involved in regulation of miRNA transcription IMP
IMP: 通过突变表型推断
18548003 GOA
involved in regulation of transcription by RNA polymerase II IMP
IMP: 通过突变表型推断
24275493 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of catalytic step 2 spliceosome IDA
IDA: 通过直接分析推断
11991638 GOA
located in nuclear speck IDA
IDA: 通过直接分析推断
24644279 GOA
located in nucleolus IDA
IDA: 通过直接分析推断
10837141 GOA
located in nucleus IDA
IDA: 通过直接分析推断
24910439 GOA
part of ribonucleoprotein complex IDA
IDA: 通过直接分析推断
18809582 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

DDX5 蛋白结构

DEAD

DEAD: DEAD/DEAH box helicase (118 - 288)

Helicase_C

Helicase_C: Helicase conserved C-terminal domain (361 - 435)

P68HR

P68HR: P68HR (NUC004) repeat (498 - 532)

P68HR

P68HR: P68HR (NUC004) repeat (551 - 583)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 500
  • 614 a.a.
蛋白主名 其他名称

probable ATP-dependent RNA helicase DDX5

ATP-dependent RNA helicase DDX5

DDX5 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra DDX5 P17844 SMAD1 Homo sapiens Q15797
Anti Tag CoIP
18548003
Intra DDX5 P17844 SMAD1 Homo sapiens Q15797
Anti Bait CoIP
18548003
Intra DDX5 P17844 SMAD1 Homo sapiens Q15797
Pull Down
18548003
Intra DDX5 P17844 MBD3 Homo sapiens O95983
Anti Bait CoIP
20676135
Intra DDX5 P17844 POLR2A Homo sapiens P24928
Pull Down
12527917
Intra DDX5 P17844 POLR2A Homo sapiens P24928
Anti Tag CoIP
17011493
Cross DDX5 P17844 Crebbp Mus musculus P45481
Anti Tag CoIP
12527917
Cross DDX5 P17844 Crebbp Mus musculus P45481
Pull Down
12527917
Intra DDX5 P17844 HDAC1 Homo sapiens Q13547
GMS
15298701
Intra DDX5 P17844 HDAC1 Homo sapiens Q13547
Anti Tag CoIP
15298701
Intra DDX5 P17844 NFAT5 Homo sapiens O94916
Anti Bait CoIP
22266867
Intra DDX5 P17844 NFAT5 Homo sapiens O94916
Anti Tag CoIP
22266867
Intra DDX5 P17844 SMAD3 Homo sapiens P84022
Pull Down
18548003
Intra DDX5 P17844 EXOSC10 Homo sapiens Q01780
PLA
23143267
Intra DDX5 P17844 FBL Homo sapiens P22087
Anti Bait CoIP
10837141
Intra DDX5 P17844 FBL Homo sapiens P22087
Y2H
10837141
Intra DDX5 P17844 TP53 Homo sapiens P04637
Pull Down
15660129
Intra DDX5 P17844 TARDBP Homo sapiens Q13148
Y2H Array
32814053
Intra DDX5 P17844 TARDBP Homo sapiens Q13148
Y2H Pooling
32814053
Intra DDX5 P17844 TARDBP Homo sapiens Q13148
Validated Y2H
32814053
Intra DDX5 P17844 TP53 Homo sapiens P04637-1
Pull Down
20818423
Intra DDX5 P17844 TP53 Homo sapiens P04637-7
Pull Down
20818423
Intra DDX5 P17844 TP53 Homo sapiens P04637-7
Anti Bait CoIP
20818423
Intra DDX5 P17844 EP300 Homo sapiens Q09472
Confocal
12527917
Intra DDX5 P17844 EP300 Homo sapiens Q09472
Anti Bait CoIP
12527917
Intra DDX5 P17844 EP300 Homo sapiens Q09472
Pull Down
12527917
Intra DDX5 P17844 CHD3 Homo sapiens Q12873
Anti Bait CoIP
20676135
Intra DDX5 P17844 DROSHA Homo sapiens Q9NRR4
Anti Bait CoIP
18548003
Cross DDX5 P17844 Runx2 Mus musculus Q08775-3
Pull Down
17960593
Intra DDX5 P17844 SMAD5 Homo sapiens Q99717
Anti Bait CoIP
18548003
Intra DDX5 P17844 SMAD5 Homo sapiens Q99717
Pull Down
18548003
Intra DDX5 P17844 SF1 Homo sapiens Q15637
Y2H Fragment Pooling
26420826
Intra DDX5 P17844 DDX17 Homo sapiens Q92841
Y2H
22365833
Intra DDX5 P17844 DDX17 Homo sapiens Q92841
Anti Tag CoIP
35271311
Intra DDX5 P17844 IPO11 Homo sapiens Q9UI26
Anti Tag CoIP
35271311
Cross DDX5 P17844 PB1 Influenza A virus Q1K9H5
Y2H
21994455
Cross DDX5 P17844 PB1 Influenza A virus Q1K9H5
Pull Down
21994455
Cross DDX5 P17844 P27958-PRO_0000037577 Hepatitis C virus P27958-PRO_0000037577
Anti Tag CoIP
15113910
Cross DDX5 P17844 P27958-PRO_0000037577 Hepatitis C virus P27958-PRO_0000037577
Anti Tag CoIP
22640416
Cross DDX5 P17844 P27958-PRO_0000037577 Hepatitis C virus P27958-PRO_0000037577
Pull Down
22640416
Cross DDX5 P17844 P29991-PRO_0000308465 Dengue virus type 2 P29991-PRO_0000308465
Y2H
21911577
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Lung Cancer

Lung Carcinoma

Non-Small Cell Lung Carcinoma

Lung Cancer, Susceptibility To

Lung Cancer, Protection Against

Adenocarcinoma Of Lung, Somatic

Adenocarcinoma Of Lung, Response To Tyrosine Kinase Inhibitor In

Nonsmall Cell Lung Cancer

Lung Neoplasm

Carcinoma Of Lung

Lung Non-Small Cell Carcinoma

Non-Small Cell Lung Cancer

Nsclc

Lung Neoplasms

Malignant Neoplasm Of Lung

Alveolar Cell Carcinoma

Nonsmall Cell Lung Cancer, Somatic

Nonsmall Cell Lung Cancer, Response To Tyrosine Kinase Inhibitor In

Nonsmall Cell Lung Cancer, Susceptibility To

Lung Cancer, Somatic

Lung Cancer, Resistance To

Cancer Of Lung

Cancer Of Bronchus

Cancer Of The Lung

Lung Malignancies

Lung Malignant Tumors

Malignant Lung Tumor

Malignant Tumor Of Lung

Pulmonary Cancer

Pulmonary Carcinoma

Pulmonary Neoplasms

Respiratory Carcinoma

LNCR

Adenocarcinoma Of Lung

Neoplasm Of Lung

Cancer Lung

Carcinoma Non-Small Cell Lung

Carcinoma, Non-Small-Cell Lung

Lung Cancers

Lung Carcinomas

Cancer, Lung

Cancer, Lung, Non-Small Cell

Primary Malignant Neoplasm Of Lung

Bronchioloalveolar Adenocarcinoma

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Rattus norvegicus DDX5 RGD RGD:619906
Canis familiaris DDX5 VGNC VGNC:39862
Bos taurus DDX5 VGNC VGNC:27972
Mus musculus DDX5 MGD MGI:105037
Macaca mulatta DDX5 VGNC VGNC:71763
Felis catus DDX5 VGNC VGNC:97398
Others DDX5 NCBI