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  2. ARHGEF3 - Rho guanine nucleotide exchange factor 3 Gene

ARHGEF3 - Rho guanine nucleotide exchange factor 3 Gene

中文名称:Rho 鸟嘌呤核苷酸交换因子 3

种属: Homo sapiens

同用名: GEF3; STA3; XPLN

基因 ID: 50650 | 基因类型: protein coding

关于 ARHGEF3

Cytogenetic location: 3p14.3 Genomic coordinates (GRCh38): 3:56,727,420-57,079,268 (from NCBI)

This gene has 15 transcripts (splice variants), 209 orthologues and 8 paralogues. Ubiquitous expression in endometrium (RPKM 17.9), adrenal (RPKM 16.7) and 24 other tissues.

功能概要

Rho 样 GTP 酶参与多种细胞过程,它们通过结合 GTP 被激活,并通过其内在 GTP 酶活性将 GTP 转化为 GDP 而失活。鸟嘌呤核苷酸交换因子 (GEF) 通过催化释放结合的 GDP 来加速 Rho GTP 酶的 GTP 酶活性。该基因编码鸟嘌呤核苷酸交换因子,可特异性激活 Rho GTPase 家族的两个成员:RHOA 和 RHOB,两者均在骨细胞生物学中发挥作用。已经确定该基因的遗传变异在骨矿物质密度 (BMD) 的测定中起作用,表明该基因与绝经后骨质疏松症有关。已发现该基因编码不同亚型的可变剪接转录物变体。[RefSeq 提供,2008 年 7 月]

Rho-like GTPases are involved in a variety of cellular processes, and they are activated by binding GTP and inactivated by conversion of GTP to GDP by their intrinsic GTPase activity. Guanine nucleotide exchange factors (GEFs) accelerate the GTPase activity of Rho GTPases by catalyzing their release of bound GDP. This gene encodes a guanine nucleotide exchange factor, which specifically activates two members of the Rho GTPase family: RHOA and RHOB, both of which have a role in bone Cell Biology. It has been identified that genetic variation in this gene plays a role in the determination of bone mineral density (BMD), indicating the implication of this gene in postmenopausal osteoporosis. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

ARHGEF3 基因产物(13)

mRNA Protein Name
NM_001128615.2 NP_001122087.1 rho guanine nucleotide exchange factor 3 isoform 1
NM_001128616.2 NP_001122088.1 rho guanine nucleotide exchange factor 3 isoform 2
NM_001289698.2 NP_001276627.1 rho guanine nucleotide exchange factor 3 isoform 4
NM_001377407.1 NP_001364336.1 rho guanine nucleotide exchange factor 3 isoform 1
NM_001377408.1 NP_001364337.1 rho guanine nucleotide exchange factor 3 isoform 5
NM_001377409.1 NP_001364338.1 rho guanine nucleotide exchange factor 3 isoform 5
NM_001377410.1 NP_001364339.1 rho guanine nucleotide exchange factor 3 isoform 5
NM_001377411.1 NP_001364340.1 rho guanine nucleotide exchange factor 3 isoform 6
NM_001377412.1 NP_001364341.1 rho guanine nucleotide exchange factor 3 isoform 6
NM_001377413.1 NP_001364342.1 rho guanine nucleotide exchange factor 3 isoform 7
NM_001377414.1 NP_001364343.1 rho guanine nucleotide exchange factor 3 isoform 8
NM_001377415.1 NP_001364344.1 rho guanine nucleotide exchange factor 3 isoform 9
NM_019555.3 NP_062455.1 rho guanine nucleotide exchange factor 3 isoform 3
基因本体论
  • 分子功能
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
25416956 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

ARHGEF3 蛋白结构

RhoGEF

RhoGEF: RhoGEF domain (127 - 302)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 526 a.a.
蛋白主名 其他名称

rho guanine nucleotide exchange factor 3

59.8 kDA protein

ARHGEF3 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra ARHGEF3 Q9NR81 PBX4 Homo sapiens Q9BYU1
Y2H Array
32296183
Intra ARHGEF3 Q9NR81 PBX4 Homo sapiens Q9BYU1
Y2H Prey Pooling
32296183
Intra ARHGEF3 Q9NR81 TERF1 Homo sapiens P54274-2
Y2H Prey Pooling
32296183
Intra ARHGEF3 Q9NR81 TERF1 Homo sapiens P54274-2
Y2H Array
32296183
Intra ARHGEF3 Q9NR81 HSF2BP Homo sapiens O75031
Y2H Array
32296183
Intra ARHGEF3 Q9NR81 HSF2BP Homo sapiens O75031
Y2H Prey Pooling
32296183
Intra ARHGEF3 Q9NR81 TRIM27 Homo sapiens P14373
Validated Y2H
25416956
Intra ARHGEF3 Q9NR81 TRIM27 Homo sapiens P14373
Y2H Prey Pooling
32296183
Intra ARHGEF3 Q9NR81 TRIM27 Homo sapiens P14373
Y2H Array
32296183
Intra ARHGEF3 Q9NR81 TRIM27 Homo sapiens P14373
Y2H Prey Pooling
25416956
Intra ARHGEF3 Q9NR81 CEP70 Homo sapiens Q8NHQ1
Y2H Array
32296183
Intra ARHGEF3 Q9NR81 CEP70 Homo sapiens Q8NHQ1
Y2H Prey Pooling
25416956
Intra ARHGEF3 Q9NR81 CEP70 Homo sapiens Q8NHQ1
Y2H Prey Pooling
32296183
Intra ARHGEF3 Q9NR81 TRIM23 Homo sapiens P36406
Y2H Prey Pooling
25416956
Intra ARHGEF3 Q9NR81 DDIT4L Homo sapiens Q96D03
Y2H Array
32296183
Intra ARHGEF3 Q9NR81 DDIT4L Homo sapiens Q96D03
Y2H Prey Pooling
32296183
Intra ARHGEF3 Q9NR81 PICK1 Homo sapiens Q9NRD5
Validated Y2H
32296183
Intra ARHGEF3 Q9NR81 PICK1 Homo sapiens Q9NRD5
Y2H Array
32296183
Intra ARHGEF3 Q9NR81 PICK1 Homo sapiens Q9NRD5
Y2H Prey Pooling
32296183
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Methotrexate-Associated Lymphoproliferation
Osteoporosis

Postmenopausal Osteoporosis

Osteoporosis, Postmenopausal

Bone Mineral Density Quantitative Trait Locus

Bmnd

Osteoporosis, Involutional

Osteoporosis, Susceptibility To

Osteoporosis, Postmenopausal, Susceptibility

Bone Mineral Density Variation Qtl, Osteoporosis

OSTEOP

Involutional Osteoporosis

Senile Osteoporosis

Osteoporosis Postmenopausal

Bone Mineral Density, Quantitative Trait Locus

Osteoporosis, Senile

Idiopathic Osteoporosis

Bone Rarefaction Nos

Type 1 Osteoporosis

Hirschsprung Disease 1

Hirschsprung Disease

Aganglionic Megacolon

Hscr

Hirschsprung'S Disease

Congenital Megacolon

Congenital Intestinal Aganglionosis

Colonic Aganglionosis

Hirschsprung Disease, Susceptibility To, 1

Hirschsprung Disease, Protection Against

HSCR1

Mgc

Pelvirectal Achalasia

Total Intestinal Aganglionosis

Megacolon, Aganglionic

Macrocolon

Hscr 1

Hirschsprung Disease Type 1

Hirschsprung Disease, Type 1

Congenital Dilatation Of Colon

Aganglionosis

Congenital Aganglionic Megacolon

Aganglionosis Of Colon

Bowel Aganglionosis

Colon Aganglionosis

Hirschsprung Megacolon

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Canis familiaris ARHGEF3 VGNC VGNC:38084
Rattus norvegicus ARHGEF3 RGD RGD:1310672
Macaca mulatta ARHGEF3 VGNC VGNC:70014
Bos taurus ARHGEF3 VGNC VGNC:26115
Felis catus ARHGEF3 VGNC VGNC:68147
Mus musculus ARHGEF3 MGD MGI:1918954