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  2. SNRPA1 - small nuclear ribonucleoprotein polypeptide A' Gene

SNRPA1 - small nuclear ribonucleoprotein polypeptide A' Gene

中文名称:小核核糖核蛋白多肽 A'

种属: Homo sapiens

同用名: Lea1; U2A'

基因 ID: 6627 | 基因类型: protein coding

关于 SNRPA1

Cytogenetic location: 15q26.3 Genomic coordinates (GRCh38): 15:101,281,510-101,295,248 (from NCBI)

This gene has 15 transcripts (splice variants), 231 orthologues and 2 paralogues. Ubiquitous expression in bone marrow (RPKM 26.0), testis (RPKM 22.8) and 25 other tissues.

功能概要

启用 RNA 结合活性。通过剪接体和精子发生参与 mRNA 剪接。位于核斑点。部分 U2 型催化步骤 2 剪接体和 U2 型预催化剪接体。与结缔组织病有关。 [由基因组资源联盟提供,2022 年 4 月]

Enables RNA binding activity. Involved in mRNA splicing, via spliceosome and spermatogenesis. Located in nuclear speck. Part of U2-type catalytic step 2 spliceosome and U2-type precatalytic spliceosome. Implicated in connective tissue disease. [provided by Alliance of Genome Resources, Apr 2022]

SNRPA1 基因产物(1)

mRNA Protein Name
NM_003090.4 NP_003081.2 U2 small nuclear ribonucleoprotein A'
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
9716128 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in mRNA splicing, via spliceosome IDA
IDA: 通过直接分析推断
28076346 GOA
involved in spermatogenesis IGI
IGI: 通过遗传相互作用推断
27035939 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of U2-type catalytic step 2 spliceosome IDA
IDA: 通过直接分析推断
28076346 GOA
part of U2-type precatalytic spliceosome IDA
IDA: 通过直接分析推断
28781166 GOA
part of U2-type spliceosomal complex IDA
IDA: 通过直接分析推断
32494006 GOA
part of catalytic step 2 spliceosome IDA
IDA: 通过直接分析推断
11991638 GOA
located in nucleus IDA
IDA: 通过直接分析推断
28076346 GOA
part of spliceosomal complex IDA
IDA: 通过直接分析推断
9731529 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

SNRPA1 蛋白结构

LRR_9

LRR_9: Leucine-rich repeat (1 - 175)

  • 0
  • 100
  • 200
  • 255 a.a.
蛋白主名 其他名称

U2 small nuclear ribonucleoprotein A'

U2 small nuclear ribonucleoprotein polypeptide A'

SNRPA1 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra SNRPA1 P09661 ZGPAT Homo sapiens Q8N5A5-2
Y2H Prey Pooling
32296183
Intra SNRPA1 P09661 ZGPAT Homo sapiens Q8N5A5-2
Validated Y2H
32296183
Intra SNRPA1 P09661 ZGPAT Homo sapiens Q8N5A5-2
Y2H Array
32296183
Intra SNRPA1 P09661 SNRPB2 Homo sapiens P08579
Anti Tag CoIP
33961781
Intra SNRPA1 P09661 SNRPB2 Homo sapiens P08579
Anti Tag CoIP
28514442
Intra SNRPA1 P09661 SNRPB2 Homo sapiens P08579
Anti Tag CoIP
22365833
Intra SNRPA1 P09661 IKZF1 Homo sapiens Q13422-7
Validated Y2H
32296183
Intra SNRPA1 P09661 IKZF1 Homo sapiens Q13422-7
Y2H Prey Pooling
32296183
Intra SNRPA1 P09661 IKZF1 Homo sapiens Q13422-7
Y2H Array
32296183
Intra SNRPA1 P09661 SF3A2 Homo sapiens Q15428
Anti Tag CoIP
33961781
Intra SNRPA1 P09661 SF3A2 Homo sapiens Q15428
Anti Tag CoIP
28514442
Intra SNRPA1 P09661 SF3A2 Homo sapiens Q15428
Affinity Chrom
17332742
Intra SNRPA1 P09661 ISY1 Homo sapiens Q9ULR0
Anti Tag CoIP
33961781
Intra SNRPA1 P09661 XAB2 Homo sapiens Q9HCS7
Crosslink
25599396
Intra SNRPA1 P09661 XAB2 Homo sapiens Q9HCS7
Anti Tag CoIP
33961781
Intra SNRPA1 P09661 XAB2 Homo sapiens Q9HCS7
Anti Tag CoIP
28514442
Intra SNRPA1 P09661 SNRPF Homo sapiens P62306
Anti Tag CoIP
33961781
Intra SNRPA1 P09661 SNRPA Homo sapiens P09012
Y2H Prey Pooling
25416956
Intra SNRPA1 P09661 SNRPA Homo sapiens P09012
Y2H Prey Pooling
32296183
Intra SNRPA1 P09661 SNRPA Homo sapiens P09012
Y2H Array
25416956
Intra SNRPA1 P09661 SNRPA Homo sapiens P09012
Y2H Array
32296183
Intra SNRPA1 P09661 PICK1 Homo sapiens Q9NRD5
Validated Y2H
32296183
Intra SNRPA1 P09661 PICK1 Homo sapiens Q9NRD5
Y2H Prey Pooling
32296183
Intra SNRPA1 P09661 PICK1 Homo sapiens Q9NRD5
Y2H Array
32296183
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Primary Optic Atrophy
Galloway-Mowat Syndrome 1

Galloway Syndrome

Nephrosis-Neuronal Dysmigration Syndrome

Nephrosis-Microcephaly Syndrome

Camos

Scar5

GAMOS1

Microcephaly, Hiatal Hernia, And Nephrotic Syndrome

Microcephaly, Hiatal Hernia And Nephrotic Syndrome

Cerebellar Ataxia With Mental Retardation, Optic Atrophy, And Skin Abnormalities

Spinocerebellar Ataxia, Autosomal Recessive 5, Formerly

Scar5, Formerly

Spinocerebellar Ataxia Autosomal Recessive 5

Cerebellar Ataxia With Intellectual Disability Optic Atrophy And Skin Abnormalities

Camos Syndrome

Cerebellar Ataxia-Intellectual Disability-Optic Atrophy-Skin Abnormalities Syndrome

Galloway-Mowat Syndrome

Spinocerebellar Ataxia, Autosomal Recessive, 5

Galloway Mowat Syndrome

Spinocerebellar Ataxia, Autosomal Recessive 5

Connective Tissue Disease

Connective Tissue Diseases

Connective Tissue Disorder

Abnormality Of Connective Tissue

Disorder Of Connective Tissue

Connective Tissue Disorders

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Rattus norvegicus SNRPA1 RGD RGD:2320494
Felis catus SNRPA1 VGNC VGNC:80840
Canis familiaris SNRPA1 VGNC VGNC:46610
Mus musculus SNRPA1 MGD MGI:1916231
Macaca mulatta SNRPA1 VGNC VGNC:77675
Bos taurus SNRPA1 VGNC VGNC:35075