1. Gene
  2. SMARCC1 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 Gene

SMARCC1 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 Gene

中文名称:SWI/SNF 相关,基质相关,染色质亚科 c 成员 1 的肌动蛋白依赖调节因子

种属: Homo sapiens

同用名: Rsc8; SRG3; SWI3; BAF155; CRACC1

基因 ID: 6599 | 基因类型: protein coding

关于 SMARCC1

Cytogenetic location: 3p21.31 Genomic coordinates (GRCh38): 3:47,585,269-47,781,893 (from NCBI)

This gene has 8 transcripts (splice variants), 234 orthologues and 3 paralogues. Ubiquitous expression in testis (RPKM 18.4), endometrium (RPKM 15.8) and 25 other tissues.

功能概要

由该基因编码的蛋白质是 SWI/SNF 蛋白质家族的成员,其成员具有解旋酶和 ATP 酶活性,被认为通过改变这些基因周围的染色质结构来调节某些基因的转录。编码的蛋白质是大型 ATP 依赖性染色质重塑复合物 SNF/SWI 的一部分,并且包含许多转录因子典型的预测亮氨酸拉链基序。[RefSeq 提供,2008 年 7 月]

The protein encoded by this gene is a member of the SWI/SNF family of proteins, whose members display helicase and ATPase activities and which are thought to regulate transcription of certain genes by altering the chromatin structure around those genes. The encoded protein is part of the large ATP-dependent chromatin remodeling complex SNF/SWI and contains a predicted leucine zipper motif typical of many transcription factors. [provided by RefSeq, Jul 2008]

SMARCC1 基因产物(1)

mRNA Protein Name
NM_003074.4 NP_003065.3 SWI/SNF complex subunit SMARCC1
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
9891079 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in chromatin remodeling IDA
IDA: 通过直接分析推断
10078207 GOA
involved in nucleosome disassembly IDA
IDA: 通过直接分析推断
8895581 GOA
involved in positive regulation of DNA-templated transcription IDA
IDA: 通过直接分析推断
11018012 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of SWI/SNF complex IDA
IDA: 通过直接分析推断
8804307 GOA
located in cytoplasm IDA
IDA: 通过直接分析推断
28753627 GOA
located in nucleus IDA
IDA: 通过直接分析推断
28753627 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

SMARCC1 蛋白结构

SWIRM

SWIRM: SWIRM domain (450 - 537)

Myb_DNA-binding

Myb_DNA-binding: Myb-like DNA-binding domain (622 - 663)

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  • 1105 a.a.
蛋白主名 其他名称

SWI/SNF complex subunit SMARCC1

BRG1-associated factor 155

SMARCC1 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
SMARCC1 Q92922 ADAMTSL4 Homo sapiens Q6UY14-3 32296183
种属内
SMARCC1 Q92922 ADAMTSL4 Homo sapiens Q6UY14-3 25416956
种属内
SMARCC1 Q92922 ADAMTSL4 Homo sapiens Q6UY14-3 25416956
种属内
SMARCC1 Q92922 ADAMTSL4 Homo sapiens Q6UY14-3 32296183
种属内
SMARCC1 Q92922 GSTO2 Homo sapiens Q9H4Y5 32296183
种属内
SMARCC1 Q92922 GSTO2 Homo sapiens Q9H4Y5 32296183
种属内
SMARCC1 Q92922 GSTO2 Homo sapiens Q9H4Y5 32296183
种属内
SMARCC1 Q92922 KRTAP13-3 Homo sapiens Q3SY46 32296183
种属内
SMARCC1 Q92922 KRTAP13-3 Homo sapiens Q3SY46 32296183
种属内
SMARCC1 Q92922 SPATA12 Homo sapiens Q7Z6I5 32296183
种属内
SMARCC1 Q92922 SPATA12 Homo sapiens Q7Z6I5 32296183
种属内
SMARCC1 Q92922 VGLL3 Homo sapiens A8MV65-2 32296183
种属内
SMARCC1 Q92922 VGLL3 Homo sapiens A8MV65-2 32296183
种属内
SMARCC1 Q92922 KRTAP6-2 Homo sapiens Q3LI66 32296183
种属内
SMARCC1 Q92922 KRTAP6-2 Homo sapiens Q3LI66 32296183
种属内
SMARCC1 Q92922 UFSP1 Homo sapiens Q6NVU6 32296183
种属内
SMARCC1 Q92922 UFSP1 Homo sapiens Q6NVU6 32296183
种属内
SMARCC1 Q92922 KRTAP6-1 Homo sapiens Q3LI64 32296183
种属内
SMARCC1 Q92922 KRTAP6-1 Homo sapiens Q3LI64 32296183
种属内
SMARCC1 Q92922 KRTAP19-2 Homo sapiens Q3LHN2 32296183
种属内
SMARCC1 Q92922 KRTAP19-2 Homo sapiens Q3LHN2 32296183
种属内
SMARCC1 Q92922 SLC15A2 Homo sapiens Q16348 32296183
种属内
SMARCC1 Q92922 SLC15A2 Homo sapiens Q16348 32296183
种属内
SMARCC1 Q92922 PPIP5K2 Homo sapiens O43314-2 32296183
种属内
SMARCC1 Q92922 PPIP5K2 Homo sapiens O43314-2 32296183
种属内
SMARCC1 Q92922 LRP2BP Homo sapiens Q9P2M1 32296183
种属内
SMARCC1 Q92922 LRP2BP Homo sapiens Q9P2M1 32296183
种属内
SMARCC1 Q92922 LRP2BP Homo sapiens Q9P2M1 32296183
种属内
SMARCC1 Q92922 KRTAP7-1 Homo sapiens Q8IUC3 32296183
种属内
SMARCC1 Q92922 KRTAP7-1 Homo sapiens Q8IUC3 32296183
种属内
SMARCC1 Q92922 KRTAP21-2 Homo sapiens Q3LI59 32296183
种属内
SMARCC1 Q92922 KRTAP21-2 Homo sapiens Q3LI59 32296183
种属内
SMARCC1 Q92922 KRTAP6-3 Homo sapiens Q3LI67 32296183
种属内
SMARCC1 Q92922 KRTAP6-3 Homo sapiens Q3LI67 32296183
种属内
SMARCC1 Q92922 CARM1 Homo sapiens Q86X55 24434208
种属内
SMARCC1 Q92922 CARM1 Homo sapiens Q86X55 24434208
种属内
SMARCC1 Q92922 PTH1R Homo sapiens Q03431 32296183
种属内
SMARCC1 Q92922 PTH1R Homo sapiens Q03431 32296183
种属内
SMARCC1 Q92922 RELB Homo sapiens Q01201
TAP
14743216
种属内
SMARCC1 Q92922 SMARCD1 Homo sapiens Q96GM5 35271311
种属内
SMARCC1 Q92922 SMARCD1 Homo sapiens Q96GM5
TAP
24981860
种属内
SMARCC1 Q92922 SMARCD1 Homo sapiens Q96GM5 24421395
种属内
SMARCC1 Q92922 SMARCD1 Homo sapiens Q96GM5 24434208
种属内
SMARCC1 Q92922 GLRX3 Homo sapiens O76003 32296183
种属内
SMARCC1 Q92922 GLRX3 Homo sapiens O76003 32296183
种属内
SMARCC1 Q92922 CYSRT1 Homo sapiens A8MQ03 32296183
种属内
SMARCC1 Q92922 CYSRT1 Homo sapiens A8MQ03 32296183
种属内
SMARCC1 Q92922 KRTAP26-1 Homo sapiens Q6PEX3 32296183
种属内
SMARCC1 Q92922 KRTAP26-1 Homo sapiens Q6PEX3 32296183
种属内
SMARCC1 Q92922 KRTAP3-3 Homo sapiens Q9BYR6 32296183
种属内
SMARCC1 Q92922 KRTAP3-3 Homo sapiens Q9BYR6 32296183
种属内
SMARCC1 Q92922 KRTAP3-3 Homo sapiens Q9BYR6 32296183
种属内
SMARCC1 Q92922 TRIM42 Homo sapiens Q8IWZ5 32296183
种属内
SMARCC1 Q92922 TRIM42 Homo sapiens Q8IWZ5 32296183
种属内
SMARCC1 Q92922 CIDEB Homo sapiens Q9UHD4 32296183
种属内
SMARCC1 Q92922 CIDEB Homo sapiens Q9UHD4 32296183
种属内
SMARCC1 Q92922 CIDEB Homo sapiens Q9UHD4 32296183
种属内
SMARCC1 Q92922 PLSCR1 Homo sapiens O15162 25416956
种属内
SMARCC1 Q92922 PLSCR1 Homo sapiens O15162 25416956
种属内
SMARCC1 Q92922 OTX1 Homo sapiens P32242 25416956
种属内
SMARCC1 Q92922 OTX1 Homo sapiens P32242 25416956
种属内
SMARCC1 Q92922 ZNF581 Homo sapiens Q9P0T4 32296183
种属内
SMARCC1 Q92922 ZNF581 Homo sapiens Q9P0T4 32296183
种属内
SMARCC1 Q92922 ZNF581 Homo sapiens Q9P0T4 32296183
种属内
SMARCC1 Q92922 KRTAP3-2 Homo sapiens Q9BYR7 32296183
种属内
SMARCC1 Q92922 KRTAP3-2 Homo sapiens Q9BYR7 32296183
种属内
SMARCC1 Q92922 CFP Homo sapiens P27918 32296183
种属内
SMARCC1 Q92922 CFP Homo sapiens P27918 32296183
种属内
SMARCC1 Q92922 ASCL1 Homo sapiens P50553 36931659
种属内
SMARCC1 Q92922 KRTAP3-1 Homo sapiens Q9BYR8 32296183
种属内
SMARCC1 Q92922 KRTAP3-1 Homo sapiens Q9BYR8 32296183
种属内
SMARCC1 Q92922 KRTAP3-1 Homo sapiens Q9BYR8 32296183
种属间: 跨种属相互作用 种属内: 同种属相互作用

SMARCC1 抗体

目录号 产品名 应用 反应物种
HY-P81308 SMARCC1 Antibody (YA1046) WB Human
HY-P81308A SMARCC1 Antibody (YA1047) WB, ICC/IF, IP, FC Human, Rat

关联疾病

疾病名称 别名
Congenital Hydrocephalus

Hydrocephalus

Hydrocephalus Adverse Event

Hydrocephalus, Nonsyndromic, Autosomal Recessive 1

Hydrocephalus In Newborn

Congenital Hydrocephaly

Neurilemmomatosis

Schwannomatosis

Neurofibromatosis Type 3

Nf3

Neurilemmomatosis Congenital Cutaneous

Neurinomatosis

Congenital Cutaneous Neurilemmomatosis

Multiple Neurilemmomas

Multiple Schwannomas

Neurilemmomatosis, Congenital Cutaneous

Schwannomatosis 1

Neurofibromatosis 3

Mixed Central And Peripheral Neurofibromatosis

Nf3 - [Neurofibromatosis Type 3]

Rhabdoid Cancer

Rhabdoid Tumor

Malignant Rhabdoid Tumor

Malignant Rhabdoid Tumour

Rhabdoid Sarcoma

Rhabdoid Tumor Predisposition Syndrome 1

Rhabdoid Tumor Predisposition Syndrome 2

Atypical Teratoid Rhabdoid Tumor

Brain Tumor, Posterior Fossa, Of Infancy, Familial

Atypical Teratoid/Rhabdoid Tumor

Kidney Rhabdoid Cancer

Rhabdoid Tumor Of The Kidney

Kidney Rhabdoid Tumor

Renal Rhabdoid Tumor

Clark-Baraitser Syndrome

CLABARS

Baraitser Syndrome

Autosomal Dominant Intellectual Disability 49

Mental Retardation, Autosomal Dominant 49, Formerly

Mrd49, Formerly

Intellectual Developmental Disorder, Autosomal Dominant 49

Autosomal Dominant Mental Retardation 49

Intellectual Disability, Tall Stature, Obesity, Macrocephaly And Typical Facial Features

Mrd49

Progeria Short Stature Pigmented Nevi

Autosomal Dominant Intellectual Developmental Disorder

Autosomal Dominant Mental Retardation

Autosomal Dominant Non-Syndromic Mental Retardation

Autosomal Dominant Non-Syndromic Intellectual Disability

Mental Retardation, Autosomal Dominant

Hydrocephalus

Hydrocephalus, Nonsyndromic, Autosomal Recessive

Hydrocephalus, X-Linked

Hydrocephalus Adverse Event

Hydrocephaly Nos

Ovarian Clear Cell Carcinoma

Clear-Cell Ovarian Carcinoma

Atypical Teratoid Rhabdoid Tumor

Rhabdoid Tumor Predisposition Syndrome

Rtps

Atypical Teratoid/Rhabdoid Tumor

Rhabdoid Predisposition Syndrome

Familial Posterior Fossa Brain Tumor Of Infancy

Familial Rhabdoid Tumor

At/Rt

Atypical Teratoid Rhabdoid Tumour

Atypical Teratoid/Rhabdoid Tumour

Rhabdoid Tumor Of The Cns

Rhabdoid Tumour Of The Cns

Familial Posterior Fossa Brain Tumor Syndrome

Hereditary Swi/Snf Deficiency Syndrome

Atrt

Coffin-Siris Syndrome 1

Coffin-Siris Syndrome

Fifth Digit Syndrome

Css

CSS1

Mrd12

Mental Retardation, Autosomal Dominant 12

Hhid

Dwarfism-Onychodysplasia

Hypertrichosis, Hyperkeratosis, Mental Retardation, And Distinctive Facial Features

Autosomal Dominant Mental Retardation 12

Short Stature-Onychodysplasia.

Intellectual Disability With Absent Fifth Fingernail And Terminal Phalanx

Mental Retardation With Hypoplastic Fifth Fingernails And Toenails

Short Stature-Onychodysplasia

Coffin-Siris Syndrome, Type 1

Mental Retardation, Autosomal Dominant, Type 12

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Felis catus SMARCC1 VGNC VGNC:65469
Macaca mulatta SMARCC1 VGNC VGNC:84075
Bos taurus SMARCC1 VGNC VGNC:58414
Canis familiaris SMARCC1 VGNC VGNC:46535
Rattus norvegicus SMARCC1 RGD RGD:1304850
Mus musculus SMARCC1 MGD MGI:1203524