1. Gene
  2. STAU1 - staufen double-stranded RNA binding protein 1 Gene

STAU1 - staufen double-stranded RNA binding protein 1 Gene

中文名称:诗道芬双链 RNA 结合蛋白 1

种属: Homo sapiens

同用名: STAU; PPP1R150

基因 ID: 6780 | 基因类型: protein coding

关于 STAU1

Cytogenetic location: 20q13.13 Genomic coordinates (GRCh38): 20:49,113,339-49,219,295 (from NCBI)

This gene has 9 transcripts (splice variants), 211 orthologues and 14 paralogues. Ubiquitous expression in kidney (RPKM 41.4), thyroid (RPKM 35.8) and 25 other tissues.

功能概要

Staufen 是双链 RNA (dsRNA) 结合蛋白家族的成员,参与将 mRNA 运输和/或定位到不同的亚细胞区室和/或细胞器。这些蛋白质的特征在于存在多个 dsRNA 结合域,这些域是结合具有双链二级结构的 RNA 所必需的。由 STAU 编码的 staufen 人类同系物另外包含一个类似于微管相关蛋白 1B 的微管结合结构域,并结合微管蛋白。 STAU 基因产物已被证明存在于与粗面内质网 (RER) 相关的细胞质中,表明该蛋白质参与了 mRNA 通过微管网络向 RER (翻译位点) 的转运。[RefSeq 提供,2020 年 4 月]

Staufen is a member of the family of double-stranded RNA (dsRNA)-binding proteins involved in the transport and/or localization of mRNAs to different subcellular compartments and/or organelles. These proteins are characterized by the presence of multiple dsRNA-binding domains which are required to bind RNAs having double-stranded secondary structures. The human homologue of staufen encoded by STAU, in addition contains a microtubule- binding domain similar to that of microtubule-associated protein 1B, and binds tubulin. The STAU gene product has been shown to be present in the cytoplasm in association with the rough endoplasmic reticulum (RER), implicating this protein in the transport of mRNA via the microtubule network to the RER, the site of translation. [provided by RefSeq, Apr 2020]

STAU1 基因产物(14)

mRNA Protein Name
NM_001037328.3 NP_001032405.1 double-stranded RNA-binding protein Staufen homolog 1 isoform c
NM_001319134.2 NP_001306063.1 double-stranded RNA-binding protein Staufen homolog 1 isoform c
NM_001319135.2 NP_001306064.1 double-stranded RNA-binding protein Staufen homolog 1 isoform b
NM_001322927.2 NP_001309856.1 double-stranded RNA-binding protein Staufen homolog 1 isoform c
NM_001322928.2 NP_001309857.1 double-stranded RNA-binding protein Staufen homolog 1 isoform d
NM_001322929.2 NP_001309858.1 double-stranded RNA-binding protein Staufen homolog 1 isoform b
NM_001322930.2 NP_001309859.1 double-stranded RNA-binding protein Staufen homolog 1 isoform b
NM_001322931.2 NP_001309860.1 double-stranded RNA-binding protein Staufen homolog 1 isoform e
NM_001322932.2 NP_001309861.1 double-stranded RNA-binding protein Staufen homolog 1 isoform f
NM_001322933.2 NP_001309862.1 double-stranded RNA-binding protein Staufen homolog 1 isoform f
NM_004602.4 NP_004593.2 double-stranded RNA-binding protein Staufen homolog 1 isoform a
NM_017452.4 NP_059346.2 double-stranded RNA-binding protein Staufen homolog 1 isoform a
NM_017453.4 NP_059347.2 double-stranded RNA-binding protein Staufen homolog 1 isoform b
NM_017454.4 NP_059348.2 double-stranded RNA-binding protein Staufen homolog 1 isoform a
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
15121898 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in positive regulation by virus of viral protein levels in host cell IMP
IMP: 通过突变表型推断
23907398 GOA
involved in positive regulation of viral genome replication IMP
IMP: 通过突变表型推断
23907398 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in cell body IDA
IDA: 通过直接分析推断
15121898 GOA
located in cytoplasm IDA
IDA: 通过直接分析推断
19029303 GOA
located in cytoplasmic ribonucleoprotein granule IDA
IDA: 通过直接分析推断
15121898 GOA
located in dendrite IDA
IDA: 通过直接分析推断
15121898 GOA
located in endoplasmic reticulum IDA
IDA: 通过直接分析推断
23907398 GOA
located in plasma membrane IDA
IDA: 通过直接分析推断
22978549 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

STAU1 蛋白结构

dsrm

dsrm: Double-stranded RNA binding motif (110 - 160)

dsrm

dsrm: Double-stranded RNA binding motif (186 - 249)

dsrm

dsrm: Double-stranded RNA binding motif (287 - 352)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 500
  • 577 a.a.
蛋白主名 其他名称

double-stranded RNA-binding protein Staufen homolog 1

protein phosphatase 1, regulatory subunit 150

STAU1 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra STAU1 O95793 ADARB1 Homo sapiens P78563-4
Validated Y2H
32296183
Intra STAU1 O95793 LONRF1 Homo sapiens Q17RB8
Validated Y2H
32296183
Intra STAU1 O95793 LONRF1 Homo sapiens Q17RB8
Y2H Array
25416956
Intra STAU1 O95793 ZMAT3 Homo sapiens Q9HA38
Y2H Array
25416956
Intra STAU1 O95793 NXT1 Homo sapiens Q9UKK6
Y2H Prey Pooling
25416956
Intra STAU1 O95793 NXT1 Homo sapiens Q9UKK6
Validated Y2H
32296183
Intra STAU1 O95793 NXT1 Homo sapiens Q9UKK6
Y2H Array
25416956
Cross STAU1 O95793 Klf4 Mus musculus Q60793
Anti Tag CoIP
29374155
Intra STAU1 O95793 RPLP0 Homo sapiens P05388
Affinity Chrom
15303970
Intra STAU1 O95793 RPLP0 Homo sapiens P05388
TAP
15121898
Intra STAU1 O95793 RPL7A Homo sapiens P62424
Affinity Chrom
15303970
Intra STAU1 O95793 RPL7A Homo sapiens P62424
Anti Tag CoIP
33961781
Intra STAU1 O95793 UPF1 Homo sapiens Q92900
Anti Tag CoIP
23722113
Intra STAU1 O95793 UPF1 Homo sapiens Q92900
Complementation
15680326
Intra STAU1 O95793 UPF1 Homo sapiens Q92900
Far-WB
15680326
Intra STAU1 O95793 UPF1 Homo sapiens Q92900
Pull Down
15680326
Intra STAU1 O95793 GLRX3 Homo sapiens O76003
Y2H Array
25416956
Intra STAU1 O95793 GLRX3 Homo sapiens O76003
Y2H Prey Pooling
25416956
Intra STAU1 O95793 GLRX3 Homo sapiens O76003
Validated Y2H
25416956
Intra STAU1 O95793 STRBP Homo sapiens Q96SI9
Validated Y2H
32296183
Cross STAU1 O95793 NS Influenza A virus P03496
Y2H Array
23853584
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Philophthalmiasis
Influenza

Flu

Influenza With Non-Respiratory Manifestation

Influenza With Other Manifestations

Influenza, Human

Influenza, Susceptibility To

Seasonal Influenza, Virus Identified

Intellectual Developmental Disorder, Autosomal Dominant 1

MRD1

Autosomal Dominant Non-Syndromic Intellectual Disability 1

Mental Retardation, Autosomal Dominant 1

Autosomal Dominant Intellectual Developmental Disorder 1

Meckel Diverticulum

Meckel'S Diverticulum

Persistent Vitelline Duct

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Mus musculus STAU1 MGD MGI:1338864
Canis familiaris STAU1 VGNC VGNC:46893
Macaca mulatta STAU1 VGNC VGNC:77909
Rattus norvegicus STAU1 RGD RGD:621778
Bos taurus STAU1 VGNC VGNC:35375
Felis catus STAU1 VGNC VGNC:65764