1. Gene
  2. XRCC4 - X-ray repair cross complementing 4 Gene

XRCC4 - X-ray repair cross complementing 4 Gene

中文名称:X 光修复交叉补 4

种属: Homo sapiens

同用名: SSMED; hXRCC4

基因 ID: 7518 | 基因类型: protein coding

关于 XRCC4

Cytogenetic location: 5q14.2 Genomic coordinates (GRCh38): 5:83,077,547-83,374,473 (from NCBI)

This gene has 6 transcripts (splice variants), 125 orthologues and is associated with 4 phenotypes. Ubiquitous expression in testis (RPKM 2.7), lymph node (RPKM 2.1) and 25 other tissues.

功能概要

由该基因编码的蛋白质与 DNA 连接酶 IV 和 DNA 依赖性蛋白激酶一起发挥修复 DNA 双链断裂的作用。该蛋白在非同源末端连接和 V (D) J 重组的完成中均发挥作用。该基因的突变可导致身材矮小、小头畸形和内分泌功能障碍 (SSMED) 。由于最后一个剪接受体位点的多态性 (rs1805377) ,NM_022406 等替代转录本变体不太可能在某些个体中表达。[RefSeq 提供,2019 年 10 月]

The protein encoded by this gene functions together with DNA Ligase IV and the DNA-dependent protein kinase in the repair of DNA double-strand breaks. This protein plays a role in both non-homologous end joining and the completion of V(D)J recombination. Mutations in this gene can cause short stature, microcephaly, and endocrine dysfunction (SSMED). Alternate transcript variants such as NM_022406 are unlikely to be expressed in some individuals due to a polymorphism (rs1805377) in the last splice acceptor site. [provided by RefSeq, Oct 2019]

XRCC4 基因产物(5)

mRNA Protein Name
NM_001318012.3 NP_001304941.1 DNA repair protein XRCC4 isoform 2
NM_001318013.2 NP_001304942.1 DNA repair protein XRCC4 isoform 3
NM_003401.5 NP_003392.1 DNA repair protein XRCC4 isoform 1
NM_022406.5 NP_071801.1 DNA repair protein XRCC4 isoform 2
NM_022550.4 NP_072044.1 DNA repair protein XRCC4 isoform 1
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
NOT enables DNA binding IDA
IDA: 通过直接分析推断
9259561 GOA
enables FHA domain binding IPI
IPI: 通过物理相互作用推断
15385968 GOA
enables identical protein binding IPI
IPI: 通过物理相互作用推断
16169070 GOA
NOT enables ligase activity IDA
IDA: 通过直接分析推断
9242410 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
9259561 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of DNA ligase IV complex IDA
IDA: 通过直接分析推断
9242410 GOA
part of DNA-dependent protein kinase-DNA ligase 4 complex IDA
IDA: 通过直接分析推断
15194694 GOA
NOT located in condensed chromosome IDA
IDA: 通过直接分析推断
12589063 GOA
is active in cytoplasm IDA
IDA: 通过直接分析推断
33725486 GOA
located in cytosol IDA
IDA: 通过直接分析推断
9259561 GOA
part of nonhomologous end joining complex IDA
IDA: 通过直接分析推断
20383123 GOA
is active in nucleus IDA
IDA: 通过直接分析推断
25597996 GOA
located in nucleus IDA
IDA: 通过直接分析推断
9259561 GOA
is active in site of double-strand break IDA
IDA: 通过直接分析推断
26774286 GOA
located in site of double-strand break IDA
IDA: 通过直接分析推断
31548606 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

XRCC4 蛋白结构

XRCC4

XRCC4: DNA double-strand break repair and V(D)J recombination protein XRCC4 (1 - 334)

  • 0
  • 100
  • 200
  • 300
  • 336 a.a.
蛋白主名 其他名称

DNA repair protein XRCC4

X-ray repair complementing defective repair in Chinese hamster cells 4

XRCC4 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra XRCC4 Q13426 FAM9B Homo sapiens Q8IZU0
Y2H Array
31515488
Intra XRCC4 Q13426 FAM9B Homo sapiens Q8IZU0
Validated Y2H
25416956
Intra XRCC4 Q13426 FAM9B Homo sapiens Q8IZU0
Validated Y2H
32296183
Intra XRCC4 Q13426 FAM9B Homo sapiens Q8IZU0
Y2H Array
25416956
Intra XRCC4 Q13426 PNKP Homo sapiens Q96T60
Validated Y2H
32296183
Intra XRCC4 Q13426 PNKP Homo sapiens Q96T60
Pull Down
15385968
Intra XRCC4 Q13426 PNKP Homo sapiens Q96T60
Anti Tag CoIP
33961781
Intra XRCC4 Q13426 PNKP Homo sapiens Q96T60
Anti Tag CoIP
28514442
Intra XRCC4 Q13426 PNKP Homo sapiens Q96T60
Anti Tag CoIP
21637298
Intra XRCC4 Q13426 MAGEA6 Homo sapiens P43360
Y2H Prey Pooling
32296183
Intra XRCC4 Q13426 MAGEA6 Homo sapiens P43360
Y2H Array
32296183
Intra XRCC4 Q13426 APLF Homo sapiens Q8IW19
Y2H
23178593
Intra XRCC4 Q13426 XRCC4 Homo sapiens Q13426-3
Y2H Bait-Prey Pool
25910212
Intra XRCC4 Q13426 XRCC4 Homo sapiens Q13426-3
Y2H Array
25910212
Intra XRCC4 Q13426 XRCC4 Homo sapiens Q13426-3
Validated Y2H
25910212
Intra XRCC4 Q13426 NHEJ1 Homo sapiens Q9H9Q4-1
X-Ray Diffraction
21768349
Intra XRCC4 Q13426 NHEJ1 Homo sapiens Q9H9Q4-1
GMS
21768349
Intra XRCC4 Q13426 NHEJ1 Homo sapiens Q9H9Q4-1
ITC
21768349
Intra XRCC4 Q13426 NHEJ1 Homo sapiens Q9H9Q4-1
TEM
21768349
Intra XRCC4 Q13426 GSC2 Homo sapiens O15499
Y2H Array
32296183
Intra XRCC4 Q13426 GSC2 Homo sapiens O15499
Y2H Prey Pooling
32296183
Intra XRCC4 Q13426 IFFO1 Homo sapiens Q0D2I5-5
X-Ray Diffraction
31548606
Intra XRCC4 Q13426 ASTE1 Homo sapiens Q2TB18
Y2H Prey Pooling
25416956
Intra XRCC4 Q13426 KRT27 Homo sapiens Q7Z3Y8
Validated Y2H
32296183
Intra XRCC4 Q13426 KRT27 Homo sapiens Q7Z3Y8
Y2H Array
32296183
Intra XRCC4 Q13426 KRT27 Homo sapiens Q7Z3Y8
Y2H Prey Pooling
32296183
Intra XRCC4 Q13426 LIG4 Homo sapiens P49917
Validated Y2H
25416956
Intra XRCC4 Q13426 LIG4 Homo sapiens P49917
Y2H Array
25416956
Intra XRCC4 Q13426 LIG4 Homo sapiens P49917
Anti Tag CoIP
33961781
Intra XRCC4 Q13426 LIG4 Homo sapiens P49917
Anti Bait CoIP
31548606
Intra XRCC4 Q13426 LIG4 Homo sapiens P49917
Anti Tag CoIP
28514442
Intra XRCC4 Q13426 LIG4 Homo sapiens P49917
Anti Tag CoIP
31548606
Intra XRCC4 Q13426 LIG4 Homo sapiens P49917
X-Ray Diffraction
11702069
Intra XRCC4 Q13426 BIN1 Homo sapiens O00499
Y2H
16275660
Intra XRCC4 Q13426 HAUS2 Homo sapiens Q9NVX0
Y2H Prey Pooling
32296183
Intra XRCC4 Q13426 HAUS2 Homo sapiens Q9NVX0
Validated Y2H
32296183
Intra XRCC4 Q13426 HAUS2 Homo sapiens Q9NVX0
Y2H Array
32296183
Intra XRCC4 Q13426 IFFO1 Homo sapiens Q0D2I5
Anti Tag CoIP
33961781
Intra XRCC4 Q13426 IFFO1 Homo sapiens Q0D2I5
Y2H Pooling
16189514
Intra XRCC4 Q13426 IFFO1 Homo sapiens Q0D2I5
Anti Bait CoIP
31548606
Intra XRCC4 Q13426 IFFO1 Homo sapiens Q0D2I5
Anti Tag CoIP
31548606
Intra XRCC4 Q13426 NHEJ1 Homo sapiens Q9H9Q4
CoIP
16439205
Intra XRCC4 Q13426 NHEJ1 Homo sapiens Q9H9Q4
Anti Bait CoIP
16439205
Intra XRCC4 Q13426 NHEJ1 Homo sapiens Q9H9Q4
BRET
29997244
Intra XRCC4 Q13426 NHEJ1 Homo sapiens Q9H9Q4
Pull Down
16439205
Intra XRCC4 Q13426 APTX Homo sapiens Q7Z2E3
Anti Tag CoIP
33961781
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Short Stature, Microcephaly, And Endocrine Dysfunction

SSMED

Microcephalic Primordial Dwarfism-Insulin Resistance Syndrome
Isolated Growth Hormone Deficiency, Type Ia

Ighd Ia

Primordial Dwarfism

Isolated Growth Hormone Deficiency Type Ia

Sexual Ateleiotic Dwarfism

Pituitary Dwarfism I

IGHD1A

Illig-Type Growth Hormone Deficiency

Growth Hormone Deficiency, Isolated, Type Ia

Congenital Ighd Type Ia

Congenital Isolated Gh Deficiency Type Ia

Congenital Isolated Growth Hormone Deficiency Type Ia

Pituitary Dwarfism 1

Growth Hormone Deficiency, Isolated, Autosomal Recessive

Autosomal Recessive Isolated Growth Hormone Deficiency

Isolated Growth Hormone Deficiency Type 1a

Congenital Ighd

Congenital Isolated Gh Deficiency

Congenital Isolated Growth Hormone Deficiency

Growth Hormone Deficiency, Isolated Autosomal Recessive

Illig Type Growth Hormone Deficiency

Non-Acquired Isolated Growth Hormone Deficiency

Growth Hormone Deficiency, Isolated, 1a

Growth Hormone Deficiency Isolated Autosomal Recessive

Dwarfism, Primordial

Dwarfism

Lig4 Syndrome

Dna Ligase Iv Deficiency

Ligase 4 Syndrome

LIG4S

Severe Combined Immunodeficiency With Sensitivity To Ionizing Radiation

Severe Combined Immunodeficiency, Athabascan Type

Severe Combined Immunodeficiency Due To Dclre1c Deficiency

Rs-Scid

Scid, Autosomal Recessive, T Cell-Negative, B Cell-Negative, Nk Cell-Positive, With Sensitivity To Ionizing Radiation

Scid Due To Artemis Deficiency

Scid Due To Dclre1c Deficiency

Scid, Athabascan Type

Scid, Athabaskan Type

Severe Combined Immunodeficiency Due To Artemis Deficiency

Severe Combined Immunodeficiency, Athabaskan Type

SCIDA

Severe Combined Immunodeficiency, Athabascan-Type

Artemis Deficiency

Severe Combined Immunodeficiency Athabaskan Type

Severe Combined Immunodeficiency Autosomal Recessive T-Cell-Negative/B-Cell-Negative/Nk-Cell-Positive With Sensitivity To Ionizing Radiation

RSSCID

Athabascan Scid

Immunodeficiency, Severe Combined, Athabascan Type

Severe Combined Immunodeficiency, Athabaskan-Type

Microcephaly

Microencephaly

Microcephalus

Microcephalic

Nanocephaly

Congenital Microcephaly

Brain Hypoplasia

Brain Nondevelopment

Cephalic Hypoplasia

Undeveloped Cerebrum

Undeveloped Brain

Micrencephalon

Micrencephaly

Combined Immunodeficiency

Combined T Cell And B Cell Immunodeficiency

Congenital Combined Immunodeficiency

Syndrome With Combined Immunodeficiency

Combined T And B Cell Immunodeficiency

Combined Immunity Deficiency

Combined Immunodeficiency Syndrome

Combined T-Cell And B-Cell Immunodeficiency

Lymphopenic Agammaglobulinaemia

Dubowitz Syndrome

Dubowitz'S Syndrome

Dwarfism-Eczema-Peculiar Facies Syndrome

Intrauterine Growth Restriction, Short Stature, Microcephaly, Mild Intellectual Disability With Behavior Problems, Eczema, And Unusual And Distinctive Faci

Multinodular Goiter
Spinocerebellar Ataxia Type 1 With Axonal Neuropathy

Scan1

Spinocerebellar Ataxia With Axonal Neuropathy Type 1

Autosomal Recessive Spinocerebellar Ataxia With Axonal Neuropathy

Scan1, Tdp1-Related Spinocerebellar Ataxia With Axonal Neuropathy

Spinocerebellar Ataxia Autosomal Recessive With Axonal Neuropathy

Spinocerebellar Ataxia With Axonal Neuropathy

Spinocerebellar Ataxia, Autosomal Recessive, With Axonal Neuropathy

Ataxia, Spinocerebellar, Autosomal Recessive With Axonal Neuropathy

Severe Combined Immunodeficiency

Scid

Severe Combined Immunodeficiency Disease

Combined T And B Cell Inborn Immunodeficiency

Immunodeficiency, Severe Combined

Scid - [Severe Combined Immunodeficiencies]

Charcot-Marie-Tooth Disease, Axonal, Type 2b2

Charcot-Marie-Tooth Disease Type 2b2

CMT2B2

Arcmt2b

Charcot-Marie-Tooth Disease, Type 2b2

Ar-Cmt2b2

Autosomal Recessive Axonal Charcot-Marie-Tooth Disease Type 2b2

Autosomal Recessive Axonal Cmt4c3

Charcot-Marie-Tooth Disease Neuronal Type 2b2

Charcot-Marie-Tooth Neuropathy Type 2b2

Charcot-Marie-Tooth Disease, Axonal, Autosomal Recessive, Type 2b2

Charcot-Marie-Tooth Disease, Neuronal, Type 2b2

Charcot-Marie-Tooth Neuropathy, Type 2b2

Charcot-Marie-Tooth Disease 2b2

Charcot-Marie-Tooth Disease Axonal Autosomal Recessive B2

Charcot-Marie-Tooth Disease Axonal Type 2b2

Seckel Syndrome

Microcephalic Primordial Dwarfism

Bird-Headed Dwarfism

Harper'S Syndrome

Virchow-Seckel Dwarfism

Nanocephalic Dwarfism

Sckl

Seckel-Type Dwarfism

Autosomal Recessive Cerebellar Ataxia

Arca

Xeroderma Pigmentosum, Variant Type

Xeroderma Pigmentosum

XPV

Xeroderma Pigmentosum Variant Type

Xeroderma Pigmentosum With Normal Dna Repair Rates

Photosensitivity With Defective Dna Synthesis

Xp

De Sanctis-Cacchione Syndrome

Desanctis-Cacchione Syndrome

Xeroderma Pigmentosa

Xerodermic Idiocy

Xeroderma Pigmentosum Variant

Xp - [Xeroderma Pigmentosum]

Atrophoderma Pigmentosum

Nijmegen Breakage Syndrome

Berlin Breakage Syndrome

NBS

Microcephaly, Normal Intelligence And Immunodeficiency

Ataxia-Telangiectasia Variant

Ataxia-Telangiectasia Variant V1

Seemanova Syndrome Ii

Immunodeficiency-Microcephaly-Chromosomal Instability Syndrome

Seemanova Syndrome Type 2

At-V1

Microcephaly With Normal Intelligence, Immunodeficiency, And Lymphoreticular Malignancies

Nonsyndromal Microcephaly, Autosomal Recessive, With Normal Intelligence

Immunodeficiency, Microcephaly, And Chromosomal Instability

Microcephaly-Immunodeficiency-Lymphoreticuloma Syndrome

Microcephaly Immunodeficiency Lymphoreticuloma

Microcephaly With Normal Intelligence Immunodeficiency And Lymphoreticular Malignancies

Nonsyndromal Microcephaly Autosomal Recessive With Normal Intelligence

Seemanova Syndrome 2

Ataxia-Telangiectasia Variant 1

Seemanova Syndrome

At V1

Ataxia-Telangiectasia, Variant 1

Microcephaly-Immunodeficiency-Lymphoid Malignancy Syndrome

V-At

Ataxia Telangiectasia Variant V1

Omenn Syndrome

Histiocytic Medullary Reticulosis

Severe Combined Immunodeficiency With Hypereosinophilia

Combined Immunodeficiency With Hypereosinophilia

Reticuloendotheliosis, Familial, With Eosinophilia

Reticuloendotheliosis Familial With Eosinophilia

Familial Reticuloendotheliosis

Omenn'S Syndrome

OS

Malignant Histiocytosis

Cockayne Syndrome A

Cockayne Syndrome Type 1

Cockayne Syndrome, Type A

Cockayne Syndrome Type I

CSA

Cockayne Syndrome Classic Form

Cockayne Syndrome Classical

Cockayne Syndrome Type A

Ckn1

Trichothiodystrophy

Ttd

Amish Brittle Hair Syndrome

Bids Syndrome

Brittle Hair-Intellectual Impairment-Decreased Fertility-Short Stature Syndrome

Ibids

Pibids

Trichothiodystrophy Syndromes

Autism Spectrum Disorder

Asd

Autism Spectrum Disorders

Autistic Continuum

Pervasive Developmental Disorder

Pervasive Development Disorder

Autistic Behavior

Autistic Disorder

Autistic

Autistic Disorder Of Childhood Onset

Infantile Autism

Childhood Autism

Kanner Syndrome

Pervasive Developmental Delay Nos

Pervasive Developmental Disorder, Not Otherwise Specified

Breast Cancer

Breast Carcinoma

Male Breast Cancer

Breast Cancer, Familial

Malignant Neoplasm Of Breast

Breast Cancer, Susceptibility To

Breast Cancer, Early-Onset

Malignant Tumor Of Breast

Carcinoma Of Male Breast

Breast Cancer, Invasive Ductal

Breast Cancer, Protection Against

Breast Cancer, Somatic

Breast Cancer, Male

Breast Cancer, Lobular, Somatic

Breast Tumor

Mammary Cancer

Mammary Tumor

Malignant Neoplasm Of Male Breast

Mammary Carcinoma

Male Breast Carcinoma

Familial Cancer Of Breast

Invasive Ductal Breast Carcinoma

Breast Cancer Susceptibility

Breast Cancer, Male, Susceptibility To

Breast Cancer, Early-Onset, Susceptibility To

Malignant Tumor Of The Breast

Mammary Neoplasm

Primary Breast Cancer

Neoplasm Of Male Breast

Carcinoma Of Breast

Breast Cancer In Men

Familial Breast Cancer

Cancer Of Breast

BC

Breast Cancer Familial

Breast Cancer Familial Male

Breast Cancer, Familial Male

Breast Male Carcinoma

Breast Neoplasms

Breast Neoplasms, Male

Mammary Tumors

Mammary Carcinomas

Cancer, Breast

Cancer, Breast, Susceptibility

Invasive Breast Ductal Carcinoma

Breast Neoplasm

Susceptibility To Breast Cancer

Mammary Neoplasms

Animal Mammary Neoplasms

Primary Malignant Neoplasm Of Breast

Infiltrating Ductal Carcinoma Of Breast

Infiltrating Duct Carcinoma Of Unspecified Site

Infiltrating Ductular Carcinoma Of Unspecified Site

Invasive Breast Carcinoma Of No Special Type

Microinvasive Carcinoma Of Breast

Carcinoma With Apocrine Differentiation

Hereditary Breast Ovarian Cancer Syndrome

Hereditary Breast And Ovarian Cancer Syndrome

Brca1- And Brca2-Associated Hereditary Breast And Ovarian Cancer

Breast And/Or Ovarian Cancer

Breast And Ovarian Cancer Syndrome

Hboc Syndrome

Hereditary Breast And Ovarian Cancer

Brca1- Brca2-Associated Hboc

Congenital Nervous System Abnormality

Congenital Neurologic Anomaly

Congenital Nervous System Disorder

Aplastic Anemia

Aplastic Anemia, Susceptibility To

Anemia Aplastic

Idiopathic Aplastic Anemia

Secondary Aplastic Anemia

Idiopathic Bone Marrow Failure

Aplastic Anemia Idiopathic

AA

Anemia, Aplastic

Aplastic Anemia, Idiopathic

Erythroid Aplasia

Aa - [Aplastic Anaemia]

Haematopoietic Aplasia

Aleukia Haemorrhagica

Anaemia Due To Decreased Red Cell Production

Aplasia Bone Marrow

Aplastic Bone Marrow

Hypoplastic Anaemia Nos

Myeloid Bone Marrow Aplasia

Pancytopenia

Panhaematopenia

Hypoproliferative Anaemia

Medullary Hypoplasia

Red Blood Cells Hypoplastic Anaemia

Panmyelophthisis

Panhemocytopenia

Refractive Hypoproliferative Anaemia

Toxic Anaemia

Toxic Aplastic Anaemia

Aplastic Anaemia Due To Toxic Cause

Idiopathic Aplastic Anaemia Nos

Fanconi Anemia, Complementation Group A

Fanconi Anemia

Fanconi Pancytopenia

Fanconi Anemia Complementation Group A

FANCA

Fa

Fanconi Panmyelopathy

Fanconi'S Anemia

Fanconi Anaemia

Fanconi'S Anaemia

Fanconi Hypoplastic Anemia

Estren-Dameshek Variant Of Fanconi Anemia

Estren-Dameshek Variant Of Fanconi Pancytopenia

Fanconi Anemia Estren-Dameshek Variant

Fanconis Anemia

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Canis familiaris XRCC4 VGNC VGNC:48468
Macaca mulatta XRCC4 VGNC VGNC:110421
Felis catus XRCC4 VGNC VGNC:67119
Bos taurus XRCC4 VGNC VGNC:37005
Rattus norvegicus XRCC4 RGD RGD:1359573
Mus musculus XRCC4 MGD MGI:1333799