1. Gene
  2. GSC2 - goosecoid homeobox 2 Gene

GSC2 - goosecoid homeobox 2 Gene

中文名称:鹅卵石同源盒 2

种属: Homo sapiens

同用名: GSCL

基因 ID: 2928 | 基因类型: protein coding

关于 GSC2

Cytogenetic location: 22q11.21 Genomic coordinates (GRCh38): 22:19,146,993-19,150,292 (from NCBI)

This gene has 1 transcript (splice variant), 133 orthologues and 50 paralogues. Low expression observed in reference dataset.

功能概要

Goosecoidlike (GSCL) 是一种包含同源结构域的基因,位于 22q11 上 VCFS/DGS 的关键区域。 Velocardiofacial 综合征 (VCFS) 是一种发育障碍,其特征是圆锥干心脏缺陷、颅面畸形和学习障碍。 VCFS 在表型上与 DiGeorge 综合征 (DGS) 相关,并且这两种综合征都与半合子 22q11 缺失相关。由于 VCFS/DGS 中受影响的许多组织和结构源自发育中胚胎的咽弓,因此认为参与胚胎发育的基因的单倍体不足可能是其病因学原因。该基因在有限数量的成人组织以及早期人类发育中表达。[RefSeq 提供,2008 年 7 月]

Goosecoidlike (GSCL), a homeodomain-containing gene, resides in the critical region for VCFS/DGS on 22q11. Velocardiofacial syndrome (VCFS) is a developmental disorder characterized by conotruncal heart defects, craniofacial anomalies, and learning disabilities. VCFS is phenotypically related to DiGeorge syndrome (DGS) and both syndromes are associated with hemizygous 22q11 deletions. Because many of the tissues and structures affected in VCFS/DGS derive from the pharyngeal arches of the developing embryo, it is believed that haploinsufficiency of a gene involved in embryonic development may be responsible for its etiology. The gene is expressed in a limited number of adult tissues, as well as in early human development. [provided by RefSeq, Jul 2008]

GSC2 基因产物(1)

mRNA Protein Name
NM_005315.2 NP_005306.1 homeobox protein goosecoid-2
基因本体论
  • 分子功能
  • 生物过程
分子功能 GO 注释 逻辑证据 参考文献 来源
enables DNA-binding transcription factor activity IDA
IDA: 通过直接分析推断
9700206 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
32296183 GOA
enables sequence-specific DNA binding IDA
IDA: 通过直接分析推断
23332764 GOA
enables sequence-specific double-stranded DNA binding IDA
IDA: 通过直接分析推断
28473536 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
acts upstream of or within regulation of transcription by RNA polymerase II IDA
IDA: 通过直接分析推断
9700206 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

GSC2 蛋白结构

Homeobox

Homeobox: Homeobox domain (127 - 183)

  • 0
  • 100
  • 205 a.a.
蛋白主名 其他名称

homeobox protein goosecoid-2

GSC2 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
GSC2 O15499 MID2 Homo sapiens Q9UJV3-2
Validated Y2H
32296183
种属内
GSC2 O15499 GCM2 Homo sapiens O75603
Validated Y2H
32296183
种属内
GSC2 O15499 LCE3E Homo sapiens Q5T5B0
Validated Y2H
32296183
种属内
GSC2 O15499 MORF4L1 Homo sapiens Q9UBU8-2
Validated Y2H
32296183
种属内
GSC2 O15499 KRT34 Homo sapiens O76011
Validated Y2H
32296183
种属内
GSC2 O15499 CALR Homo sapiens P27797
Validated Y2H
32296183
种属内
GSC2 O15499 PRKAB2 Homo sapiens O43741
Validated Y2H
32296183
种属内
GSC2 O15499 MRPS23 Homo sapiens Q9Y3D9
Validated Y2H
32296183
种属内
GSC2 O15499 C19orf47 Homo sapiens Q8N9M1-2
Validated Y2H
32296183
种属内
GSC2 O15499 YPEL5 Homo sapiens P62699
Validated Y2H
32296183
种属内
GSC2 O15499 EGLN3 Homo sapiens Q9H6Z9
Validated Y2H
32296183
种属内
GSC2 O15499 VCX2 Homo sapiens Q3SXR9
Validated Y2H
32296183
种属内
GSC2 O15499 ZNF444 Homo sapiens Q8N0Y2-2
Validated Y2H
32296183
种属内
GSC2 O15499 ASPH Homo sapiens Q12797-6
Validated Y2H
32296183
种属内
GSC2 O15499 ALPP Homo sapiens P05187
Validated Y2H
32296183
种属内
GSC2 O15499 PDE4C Homo sapiens Q08493-2
Validated Y2H
32296183
种属内
GSC2 O15499 SCAF1 Homo sapiens Q9H7N4
Validated Y2H
32296183
种属内
GSC2 O15499 LTO1 Homo sapiens Q8WV07
Validated Y2H
32296183
种属内
GSC2 O15499 CRCP Homo sapiens O75575-2
Validated Y2H
32296183
种属内
GSC2 O15499 GALNT11 Homo sapiens Q8NCW6-2
Validated Y2H
32296183
种属内
GSC2 O15499 GTSF1L Homo sapiens Q9H1H1
Validated Y2H
32296183
种属内
GSC2 O15499 BEST3 Homo sapiens Q8N1M1-5
Validated Y2H
32296183
种属内
GSC2 O15499 UBE2R2 Homo sapiens Q712K3
Validated Y2H
32296183
种属内
GSC2 O15499 MRPL53 Homo sapiens Q96EL3
Validated Y2H
32296183
种属内
GSC2 O15499 TIPIN Homo sapiens Q9BVW5
Validated Y2H
32296183
种属内
GSC2 O15499 HMBOX1 Homo sapiens Q6NT76
Validated Y2H
32296183
种属内
GSC2 O15499 ETFDH Homo sapiens Q16134
Validated Y2H
32296183
种属内
GSC2 O15499 ANXA5 Homo sapiens P08758
Validated Y2H
32296183
种属内
GSC2 O15499 CSNK2A1 Homo sapiens P68400
Validated Y2H
32296183
种属内
GSC2 O15499 EIF5A Homo sapiens P63241
Validated Y2H
32296183
种属内
GSC2 O15499 C1D Homo sapiens Q13901
Validated Y2H
32296183
种属内
GSC2 O15499 KRTAP5-9 Homo sapiens P26371
Validated Y2H
32296183
种属内
GSC2 O15499 PTER Homo sapiens Q96BW5
Validated Y2H
32296183
种属内
GSC2 O15499 KDM6A Homo sapiens O15550
Validated Y2H
32296183
种属内
GSC2 O15499 MARF1 Homo sapiens Q9Y4F3
Validated Y2H
32296183
种属内
GSC2 O15499 DYRK1B Homo sapiens Q9Y463
Validated Y2H
32296183
种属内
GSC2 O15499 GTF2H5 Homo sapiens Q6ZYL4
Validated Y2H
32296183
种属内
GSC2 O15499 ISX Homo sapiens Q2M1V0
Validated Y2H
32296183
种属内
GSC2 O15499 KLHL38 Homo sapiens Q2WGJ6
Validated Y2H
32296183
种属内
GSC2 O15499 ZNF587 Homo sapiens Q96SQ5
Validated Y2H
32296183
种属内
GSC2 O15499 GUCA1A Homo sapiens P43080
Validated Y2H
32296183
种属内
GSC2 O15499 GUCY1A2 Homo sapiens P33402
Validated Y2H
32296183
种属内
GSC2 O15499 MAPK9 Homo sapiens P45984
Validated Y2H
32296183
种属内
GSC2 O15499 XRCC4 Homo sapiens Q13426
Validated Y2H
32296183
种属内
GSC2 O15499 PACSIN2 Homo sapiens Q9UNF0
Validated Y2H
32296183
种属内
GSC2 O15499 FKBP6 Homo sapiens O75344
Validated Y2H
32296183
种属内
GSC2 O15499 NME7 Homo sapiens Q9Y5B8
Validated Y2H
32296183
种属内
GSC2 O15499 CDKN2D Homo sapiens P55273
Y2H Prey Pooling
32296183
种属内
GSC2 O15499 CDKN2D Homo sapiens P55273
Validated Y2H
32296183
种属内
GSC2 O15499 TSR2 Homo sapiens Q969E8
Validated Y2H
32296183
种属内
GSC2 O15499 COL8A1 Homo sapiens P27658
Validated Y2H
32296183
种属内
GSC2 O15499 CIAO2A Homo sapiens Q9H5X1
Validated Y2H
32296183
种属内
GSC2 O15499 BNIP2 Homo sapiens Q12982
Validated Y2H
32296183
种属内
GSC2 O15499 MAD2L2 Homo sapiens Q9UI95
Validated Y2H
32296183
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Digeorge Syndrome

Chromosome 22q11.2 Deletion Syndrome

DGS

Hypoplasia Of Thymus And Parathyroids

Third And Fourth Pharyngeal Pouch Syndrome

22q11.2 Deletion Syndrome

Digeorge Sequence

Digeorge'S Syndrome

Pharyngeal Pouch Syndrome

Di-George Syndrome

Shprintzen Syndrome

Velocardiofacial Syndrome

Shprintzen Syndrome

VCFS

Chromosome 22q11.2 Deletion Syndrome

Vcf Syndrome

Shprintzen Vcf Syndrome

Vcf-Velocardiofacial Syndrome

Velo-Cardio-Facial Syndrome

Digeorge Syndrome

22q11 Deletion Syndrome

Conotruncal Anomaly Face Syndrome

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Rattus norvegicus GSC2 RGD RGD:1305333
Mus musculus GSC2 MGD MGI:892006
Macaca mulatta GSC2 VGNC VGNC:73297
Felis catus GSC2 VGNC VGNC:107708
Bos taurus GSC2 VGNC VGNC:97276