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  2. DDX21 - DExD-box helicase 21 Gene

DDX21 - DExD-box helicase 21 Gene

中文名称:DExD-box 解旋酶 21

种属: Homo sapiens

同用名: RH; GUA; GURDB; II/Gu; RH II/Gu; RH-II/GU; gu-alpha; RH-II/GuA

基因 ID: 9188 | 基因类型: protein coding

关于 DDX21

Cytogenetic location: 10q22.1 Genomic coordinates (GRCh38): 10:68,956,170-68,985,068 (from NCBI)

This gene has 12 transcripts (splice variants), 233 orthologues and 38 paralogues. Ubiquitous expression in bone marrow (RPKM 38.2), appendix (RPKM 33.3) and 25 other tissues.

功能概要

以保守基序 Asp-Glu-Ala-Asp (DEAD) 为特征的 DEAD 盒蛋白是推定的 RNA 解旋酶。它们涉及许多涉及 RNA 二级结构改变的细胞过程,例如翻译起始、核和线粒体剪接以及核糖体和剪接体组装。根据它们的分布模式,该家族的一些成员被认为参与了胚胎发生、精子发生以及细胞生长和分裂。该基因编码一种 DEAD box 蛋白,这是一种被西瓜胃病患者的自身免疫抗体识别的抗原。这种蛋白质解开双链 RNA,折叠单链 RNA,并可能在核糖体 RNA 生物发生、RNA 编辑、RNA 运输和一般转录中发挥重要作用。[RefSeq 提供,2008 年 7 月]

DEAD box proteins, characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. They are implicated in a number of cellular processes involving alteration of RNA secondary structure such as translation initiation, nuclear and mitochondrial splicing, and ribosome and spliceosome assembly. Based on their distribution patterns, some members of this family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. This gene encodes a DEAD box protein, which is an antigen recognized by autoimmune Antibodies from a patient with watermelon stomach disease. This protein unwinds double-stranded RNA, folds single-stranded RNA, and may play important roles in ribosomal RNA biogenesis, RNA editing, RNA transport, and general transcription. [provided by RefSeq, Jul 2008]

DDX21 基因产物(3)

mRNA Protein Name
NM_001256910.2 NP_001243839.1 nucleolar RNA helicase 2 isoform 2
NM_001410932.1 NP_001397861.1 nucleolar RNA helicase 2 isoform 3
NM_004728.4 NP_004719.2 nucleolar RNA helicase 2 isoform 1
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables 7SK snRNA binding IDA
IDA: 通过直接分析推断
25470060 GOA
enables RNA helicase activity IDA
IDA: 通过直接分析推断
9461305 GOA
enables RNA helicase activity IMP
IMP: 通过突变表型推断
25470060 GOA
enables miRNA binding IDA
IDA: 通过直接分析推断
28431233 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
15034300 GOA
enables rRNA binding IDA
IDA: 通过直接分析推断
25470060 GOA
enables snoRNA binding IDA
IDA: 通过直接分析推断
25470060 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in R-loop processing IDA
IDA: 通过直接分析推断
28790157 GOA
involved in positive regulation of transcription by RNA polymerase III IDA
IDA: 通过直接分析推断
16603771 GOA
involved in transcription by RNA polymerase II IMP
IMP: 通过突变表型推断
25470060 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of B-WICH complex IDA
IDA: 通过直接分析推断
16603771 GOA
located in nucleolus IDA
IDA: 通过直接分析推断
28790157 GOA
located in nucleoplasm IDA
IDA: 通过直接分析推断
28790157 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

DDX21 蛋白结构

DEAD

DEAD: DEAD/DEAH box helicase (211 - 380)

Helicase_C

Helicase_C: Helicase conserved C-terminal domain (464 - 532)

GUCT

GUCT: GUCT (NUC152) domain (620 - 715)

  • 0
  • 200
  • 400
  • 600
  • 783 a.a.
蛋白主名 其他名称

nucleolar RNA helicase 2

DEAD (Asp-Glu-Ala-Asp) box helicase 21

关联疾病

疾病名称 别名
Stomach Disease

Gastropathy

Stomach Diseases

Gastric Disease

Stomach Disorder

Gastric Disorder

Stomach Disorders

Gastric Antral Vascular Ectasia

Watermelon Stomach

Gave

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Canis familiaris DDX21 VGNC VGNC:39849
Mus musculus DDX21 MGD MGI:1860494
Bos taurus DDX21 VGNC VGNC:97259
Rattus norvegicus DDX21 RGD RGD:1307306