1. Gene
  2. SNX9 - sorting nexin 9 Gene

SNX9 - sorting nexin 9 Gene

中文名称:排序 nexin 9

种属: Homo sapiens

同用名: SDP1; WISP; SH3PX1; SH3PXD3A

基因 ID: 51429 | 基因类型: protein coding

关于 SNX9

Cytogenetic location: 6q25.3 Genomic coordinates (GRCh38): 6:157,823,246-157,945,077 (from NCBI)

This gene has 23 transcripts (splice variants), 252 orthologues and 15 paralogues. Ubiquitous expression in gall bladder (RPKM 27.0), esophagus (RPKM 26.7) and 25 other tissues.

功能概要

该基因编码分选连接蛋白家族的一个成员。该家族的成员包含磷酸肌醇结合域,并参与细胞内运输。编码的蛋白质不像某些家族成员那样包含卷曲螺旋区域,但在其 N 末端附近包含一个 Src 同源结构域。据报道,编码的蛋白质具有多种相互作用伙伴,包括衔接蛋白 2、动力蛋白、酪氨酸激酶非受体 2、Wiskott-Aldrich 综合征样和 ARP3 肌动蛋白相关蛋白 3。编码的蛋白质涉及多种细胞内运输的各个阶段,包括胞吞作用、巨胞饮作用和 F-肌动蛋白成核。[RefSeq 提供,2013 年 7 月]

This gene encodes a member of the sorting nexin family. Members of this family contain a phosphoinositide binding domain, and are involved in intracellular trafficking. The encoded protein does not contain a coiled coil region, like some family members, but does contain a Src homology domain near its N-terminus. The encoded protein is reported to have a variety of interaction partners, including of adaptor protein 2 , Dynamin, tyrosine kinase non-receptor 2, Wiskott-Aldrich syndrome-like, and ARP3 actin-related protein 3. The encoded protein is implicated in several stages of intracellular trafficking, including endocytosis, macropinocytosis, and F-actin nucleation. [provided by RefSeq, Jul 2013]

SNX9 基因产物(1)

mRNA Protein Name
NM_016224.5 NP_057308.1 sorting nexin-9
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables 1-phosphatidylinositol binding IDA
IDA: 通过直接分析推断
17948057 GOA
enables Arp2/3 complex binding IDA
IDA: 通过直接分析推断
18388313 GOA
enables identical protein binding IPI
IPI: 通过物理相互作用推断
18940612 GOA
enables phosphatidylinositol binding IDA
IDA: 通过直接分析推断
18388313 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
10531379 GOA
enables protein homodimerization activity IPI
IPI: 通过物理相互作用推断
17948057 GOA
enables ubiquitin protein ligase binding IPI
IPI: 通过物理相互作用推断
20491914 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in cleavage furrow formation IMP
IMP: 通过突变表型推断
22718350 GOA
involved in endocytosis IMP
IMP: 通过突变表型推断
22718350 GOA
involved in endosomal transport IMP
IMP: 通过突变表型推断
22718350 GOA
involved in intracellular protein transport IMP
IMP: 通过突变表型推断
15703209 GOA
involved in lipid tube assembly IDA
IDA: 通过直接分析推断
17948057 GOA
involved in mitotic cytokinesis IMP
IMP: 通过突变表型推断
22718350 GOA
involved in plasma membrane tubulation IDA
IDA: 通过直接分析推断
18388313 GOA
involved in positive regulation of GTPase activity IDA
IDA: 通过直接分析推断
15703209 GOA
involved in positive regulation of membrane protein ectodomain proteolysis IDA
IDA: 通过直接分析推断
18353773 GOA
involved in positive regulation of protein kinase activity IDA
IDA: 通过直接分析推断
18388313 GOA
involved in protein-containing complex assembly IDA
IDA: 通过直接分析推断
15703209 GOA
involved in receptor-mediated endocytosis IMP
IMP: 通过突变表型推断
15703209 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in clathrin-coated pit IDA
IDA: 通过直接分析推断
15703209 GOA
colocalizes with clathrin-coated vesicle IDA
IDA: 通过直接分析推断
15703209 GOA
located in cytoplasm IDA
IDA: 通过直接分析推断
18388313 GOA
located in cytoplasmic vesicle IDA
IDA: 通过直接分析推断
15703209 GOA
located in cytoplasmic vesicle membrane IDA
IDA: 通过直接分析推断
17948057 GOA
located in plasma membrane IDA
IDA: 通过直接分析推断
18388313 GOA
located in trans-Golgi network IDA
IDA: 通过直接分析推断
15703209 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

SNX9 蛋白结构

SH3_1

SH3_1: SH3 domain (7 - 54)

PX

PX: PX domain (249 - 356)

BAR_3_WASP_bdg

BAR_3_WASP_bdg: WASP-binding domain of Sorting nexin protein (358 - 592)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 500
  • 595 a.a.
蛋白主名 其他名称

sorting nexin-9

SH3 and PX domain-containing protein 1

SNX9 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra SNX9 Q9Y5X1 ITCH Homo sapiens Q96J02
Anti Tag CoIP
20491914
Intra SNX9 Q9Y5X1 ITCH Homo sapiens Q96J02
Anti Bait CoIP
20491914
Intra SNX9 Q9Y5X1 ITCH Homo sapiens Q96J02
Pull Down
20491914
Intra SNX9 Q9Y5X1 SOS1 Homo sapiens Q07889
CoIP
14679214
Intra SNX9 Q9Y5X1 SOS1 Homo sapiens Q07889
Pull Down
14679214
Intra SNX9 Q9Y5X1 SOS2 Homo sapiens Q07890
CoIP
14679214
Intra SNX9 Q9Y5X1 SOS2 Homo sapiens Q07890
Pull Down
14679214
Intra SNX9 Q9Y5X1 UBC Homo sapiens P0CG48
Anti Tag CoIP
20491914
Intra SNX9 Q9Y5X1 WAS Homo sapiens P42768
Y2H
17242350
Intra SNX9 Q9Y5X1 DNM2 Homo sapiens P50570
Anti Tag CoIP
35271311
Intra SNX9 Q9Y5X1 DNM2 Homo sapiens P50570
Anti Tag CoIP
15703209
Intra SNX9 Q9Y5X1 DNM2 Homo sapiens P50570
Imaging
15703209
Intra SNX9 Q9Y5X1 DNM2 Homo sapiens P50570
BFG-2H
27107012
Intra SNX9 Q9Y5X1 DNM2 Homo sapiens P50570
Anti Tag CoIP
33961781
Intra SNX9 Q9Y5X1 DNM2 Homo sapiens P50570
Pull Down
18388313
Intra SNX9 Q9Y5X1 FASLG Homo sapiens P48023
Anti Tag CoIP
19807924
Intra SNX9 Q9Y5X1 FASLG Homo sapiens P48023
Phage Display
19807924
Intra SNX9 Q9Y5X1 OCRL Homo sapiens Q01968
Anti Tag CoIP
25107275
Intra SNX9 Q9Y5X1 DNM1 Homo sapiens Q05193
Anti Tag CoIP
33961781
Intra SNX9 Q9Y5X1 DNM1 Homo sapiens Q05193
Anti Bait CoIP
18353773
Intra SNX9 Q9Y5X1 DNM1 Homo sapiens Q05193
Anti Tag CoIP
15703209
Intra SNX9 Q9Y5X1 DNM1 Homo sapiens Q05193
Anti Tag CoIP
18353773
Intra SNX9 Q9Y5X1 ATRAID Homo sapiens Q6UW56
Pull Down
18388313
Intra SNX9 Q9Y5X1 ADAM15 Homo sapiens Q13444
Filter Binding
16374509
Intra SNX9 Q9Y5X1 SNX9 Homo sapiens Q9Y5X1
Solution Sedimentation
18940612
Intra SNX9 Q9Y5X1 SNX9 Homo sapiens Q9Y5X1
GMS
18940612
Intra SNX9 Q9Y5X1 SNX9 Homo sapiens Q9Y5X1
X-Ray Diffraction
18940612
Intra SNX9 Q9Y5X1 SNX9 Homo sapiens Q9Y5X1
SAXS
18940612
Intra SNX9 Q9Y5X1 WASL Homo sapiens O00401
Anti Tag CoIP
18388313
Intra SNX9 Q9Y5X1 WASL Homo sapiens O00401
Pull Down
18388313
Cross SNX9 Q9Y5X1 espF Escherichia coli O127:H6 B7UM88
Anti Bait CoIP
16585770
Cross SNX9 Q9Y5X1 espF Escherichia coli O127:H6 B7UM88
Y2H
16585770
Cross SNX9 Q9Y5X1 espF Escherichia coli O127:H6 B7UM88
Far-WB
16585770
Cross SNX9 Q9Y5X1 TNK2 Bos taurus Q17R13
Pull Down
11799118
Cross SNX9 Q9Y5X1 TNK2 Bos taurus Q17R13
CoIP
11799118
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Wiskott-Aldrich Syndrome

WAS

Eczema-Thrombocytopenia-Immunodeficiency Syndrome

Immunodeficiency 2

Aldrich Syndrome

Imd2

Wiskott-Aldrich Syndrome 1

Was1

Wiskott Syndrome

Wiskott Aldrich Syndrome

Eczema Thrombocytopenia Immunodeficiency Syndrome

Imd 2

Trichothiodystrophy 3, Photosensitive

TTD3

Trichothiodystrophy, Complementation Group A

Ttda

Photosensitive Trichothiodystrophy 3

Trichothiodystrophy Complementation Group A

Lowe Oculocerebrorenal Syndrome

Lowe Syndrome

Oculocerebrorenal Syndrome

OCRL

Oculocerebrorenal Syndrome Of Lowe

Ocrl1

Phosphatidylinositol 4,5-Bisphosphate 5-Phosphatase Deficiency

Lowe Disease

Phosphatidylinositol 4,5-Biphosphate 5-Phosphatase Deficiency

Cerebrooculorenal Syndrome

Phosphatidylinositol-4,5-Bisphosphate-5-Phosphatase Deficiency

Lowe Oculo-Cerebro-Renal Dystrophy

Lowe Oculo-Cerebro-Renal Syndrome

Lowe Oculocerebrorenal Dystrophy

Low

Chromosome 11p Deletion Syndrome

Oculocerebrorenal Dystrophy

Cerebro-Oculorenal Dystrophy

Ocrl1 - [Oculocerebrorenal Syndrome]

Lowe-Terrey-Maclachlan Syndrome

Renal-Oculocerebrodystrophy

Coffin-Siris Syndrome 1

Coffin-Siris Syndrome

Fifth Digit Syndrome

Css

CSS1

Mrd12

Mental Retardation, Autosomal Dominant 12

Hhid

Dwarfism-Onychodysplasia

Hypertrichosis, Hyperkeratosis, Mental Retardation, And Distinctive Facial Features

Autosomal Dominant Mental Retardation 12

Short Stature-Onychodysplasia.

Intellectual Disability With Absent Fifth Fingernail And Terminal Phalanx

Mental Retardation With Hypoplastic Fifth Fingernails And Toenails

Short Stature-Onychodysplasia

Coffin-Siris Syndrome, Type 1

Mental Retardation, Autosomal Dominant, Type 12

Neuropathy, Congenital Hypomyelinating, 1, Autosomal Recessive

Charcot-Marie-Tooth Disease Type 4

Charcot-Marie-Tooth Disease Type 4e

Hereditary Motor And Sensory Neuropathy

Cmt4e

CHN1

Hypomyelinating Neuropathy, Congenital, 1

Charcot-Marie-Tooth Neuropathy Type 4e

Neuropathy, Congenital Hypomyelinating, 1

Ar-Cmt1

Autosomal Recessive Demyelinating Charcot-Marie-Tooth

Cmt4

Neuropathy, Congenital Hypomyelinating Or Amyelinating, Autosomal Recessive

Hypomyelination, Severe Congenital

Charcot-Marie-Tooth Disease, Type 4e

Charcot-Marie-Tooth Neuropathy, Type 4e

Autosomal Recessive Congenital Hypomyelinating Or Amyelinating Neuropathy

Autosomal Recessive Congenital Hypomyelinating Neuropathy

Congenital Amyelinating Neuropathy

Congenital Hypomyelinating Neuropathy Autosomal Recessive

Neuropathy, Congenital Hypomyelinating Or Amyelinating

Severe Congenital Hypomyelination

Hereditary Sensory Motor Neuropathy

Charcot-Marie-Tooth Disease, Demyelinating, Autosomal Recessive

Neuropathy, Hypomyelinating, Congenital, Type 1

Neuropathy, Motor And Sensory, Hereditary

Congenital Hypomyelinating Neuropathy

Hereditary Motor And Sensory Neuropathies

Hereditary Sensorimotor Neuropathy

Hmsn - [Hereditary Motor And Sensory Neuropathy]

Hsmn - [Hereditary Sensory And Motor Neuropathy]

Hereditary Motor And Sensory Neuropathy, Types I-Iv

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Mus musculus SNX9 MGD MGI:1913866
Bos taurus SNX9 VGNC VGNC:35115
Rattus norvegicus SNX9 RGD RGD:1584466
Felis catus SNX9 VGNC VGNC:65560
Canis familiaris SNX9 VGNC VGNC:46645
Macaca mulatta SNX9 VGNC VGNC:77704