1. Gene
  2. U2AF2 - U2 small nuclear RNA auxiliary factor 2 Gene

U2AF2 - U2 small nuclear RNA auxiliary factor 2 Gene

中文名称:U2 小核 RNA 辅助因子 2

种属: Homo sapiens

同用名: U2AF65

基因 ID: 11338 | 基因类型: protein coding

关于 U2AF2

Cytogenetic location: 19q13.42 Genomic coordinates (GRCh38): 19:55,655,035-55,674,716 (from NCBI)

This gene has 7 transcripts (splice variants), 233 orthologues, 5 paralogues and is associated with 1 phenotype. Ubiquitous expression in spleen (RPKM 33.5), appendix (RPKM 33.2) and 25 other tissues.

功能概要

U2 辅助因子 (U2AF) 由一个大亚基和一个小亚基组成,是 U2 snRNP 与 pre-mRNA 分支位点结合所需的非 snRNP 蛋白。该基因编码 U2AF 大亚基,该亚基包含一个具有 3 个 RNA 识别基序的序列特异性 RNA 结合区和一个剪接所需的富含 Arg/Ser 的结构域。在剪接体组装的早期,大亚基与内含子的聚嘧啶束结合。已检测到该基因的多个转录变体,但迄今为止仅确定了两个的全长性质。[RefSeq 提供,2008 年 7 月]

U2 auxiliary factor (U2AF), comprised of a large and a small subunit, is a non-snRNP protein required for the binding of U2 snRNP to the pre-mRNA branch site. This gene encodes the U2AF large subunit which contains a sequence-specific RNA-binding region with 3 RNA recognition motifs and an Arg/Ser-rich domain necessary for splicing. The large subunit binds to the polypyrimidine tract of introns early during spliceosome assembly. Multiple transcript variants have been detected for this gene, but the full-length natures of only two have been determined to date. [provided by RefSeq, Jul 2008]

U2AF2 基因产物(2)

mRNA Protein Name
NM_001012478.2 NP_001012496.1 splicing factor U2AF 65 kDa subunit isoform b
NM_007279.3 NP_009210.1 splicing factor U2AF 65 kDa subunit isoform a
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables enzyme binding IPI
IPI: 通过物理相互作用推断
19574390 GOA
enables molecular function inhibitor activity EXP
EXP: 通过实验结果推断
32188783 GOA
enables pre-mRNA 3'-splice site binding IDA
IDA: 通过直接分析推断
2531895 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
9237760 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in mRNA splicing, via spliceosome IDA
IDA: 通过直接分析推断
1824937 GOA
involved in negative regulation of mRNA splicing, via spliceosome IDA
IDA: 通过直接分析推断
15009664 GOA
involved in negative regulation of protein ubiquitination IDA
IDA: 通过直接分析推断
24389012 GOA
involved in negative regulation of protein ubiquitination IMP
IMP: 通过突变表型推断
24389012 GOA
involved in positive regulation of RNA splicing IDA
IDA: 通过直接分析推断
21536736 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of Prp19 complex IDA
IDA: 通过直接分析推断
21536736 GOA
part of U2-type prespliceosome IDA
IDA: 通过直接分析推断
2531895 GOA
part of U2AF complex IDA
IDA: 通过直接分析推断
1824937 GOA
part of U2AF complex IPI
IPI: 通过物理相互作用推断
11551507 GOA
located in nuclear speck IDA
IDA: 通过直接分析推断
1824937 GOA
located in nucleus IDA
IDA: 通过直接分析推断
1824937 GOA
part of spliceosomal complex IDA
IDA: 通过直接分析推断
9731529 GOA
part of spliceosomal complex IPI
IPI: 通过物理相互作用推断
11551507 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

U2AF2 蛋白结构

(151 - 225)

RRM_1

RRM_1: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (261 - 330)

RRM_1

RRM_1: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (400 - 459)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 475 a.a.
蛋白主名 其他名称

splicing factor U2AF 65 kDa subunit

U2 (RNU2) small nuclear RNA auxiliary factor 2

U2AF2 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
U2AF2 P26368 DACH1 Homo sapiens Q9UI36-2
Validated Y2H
25416956
种属内
U2AF2 P26368 DACH1 Homo sapiens Q9UI36-2
Y2H Array
25416956
种属内
U2AF2 P26368 PUF60 Homo sapiens Q9UHX1
Y2H Pooling
16189514
种属内
U2AF2 P26368 CHERP Homo sapiens Q8IWX8
Y2H
22365833
种属内
U2AF2 P26368 SUGP1 Homo sapiens Q8IWZ8
Anti Tag CoIP
22365833
种属内
U2AF2 P26368 SCAF11 Homo sapiens Q99590
Anti Tag CoIP
33961781
种属内
U2AF2 P26368 SCAF11 Homo sapiens Q99590
Y2H
21988832
种属内
U2AF2 P26368 SRSF1 Homo sapiens Q07955
Anti Tag CoIP
33961781
种属内
U2AF2 P26368 SRPK2 Homo sapiens P78362
Anti Tag CoIP
33961781
种属内
U2AF2 P26368 SNRPA Homo sapiens P09012
Y2H
22365833
种属内
U2AF2 P26368 SNRPA Homo sapiens P09012
Y2H Prey Pooling
25416956
种属内
U2AF2 P26368 SNRPA Homo sapiens P09012
Y2H Array
25416956
种属内
U2AF2 P26368 U2AF1 Homo sapiens Q01081
Y2H
21988832
种属内
U2AF2 P26368 U2AF1 Homo sapiens Q01081
Y2H Prey Pooling
25416956
种属内
U2AF2 P26368 U2AF1 Homo sapiens Q01081
Pull Down
21460037
种属内
U2AF2 P26368 U2AF1 Homo sapiens Q01081
Anti Tag CoIP
35271311
种属内
U2AF2 P26368 U2AF1 Homo sapiens Q01081
Anti Bait CoIP
21460037
种属内
U2AF2 P26368 U2AF1 Homo sapiens Q01081
X-Ray Diffraction
11551507
种属内
U2AF2 P26368 U2AF1 Homo sapiens Q01081
Y2H Array
25416956
种属内
U2AF2 P26368 U2AF1 Homo sapiens Q01081
Y2H
21516116
种属内
U2AF2 P26368 U2AF1 Homo sapiens Q01081
Anti Tag CoIP
33961781
种属内
U2AF2 P26368 SNW1 Homo sapiens Q13573
Pull Down
21460037
种属内
U2AF2 P26368 SNW1 Homo sapiens Q13573
Anti Bait CoIP
21460037
种属内
U2AF2 P26368 TLE5 Homo sapiens Q08117
Validated Y2H
25416956
种属内
U2AF2 P26368 RBM10 Homo sapiens P98175
Anti Tag CoIP
35271311
种属内
U2AF2 P26368 RBM10 Homo sapiens P98175
Anti Tag CoIP
22365833
种属内
U2AF2 P26368 THAP1 Homo sapiens Q9NVV9
Y2H Array
25416956
种属内
U2AF2 P26368 THAP1 Homo sapiens Q9NVV9
Y2H Pooling
16189514
种属内
U2AF2 P26368 PRPF3 Homo sapiens O43395
Anti Tag CoIP
22365833
种属内
U2AF2 P26368 PRPF3 Homo sapiens O43395
Anti Tag CoIP
35271311
种属内
U2AF2 P26368 SF1 Homo sapiens Q15637
Pull Down
26420826
种属内
U2AF2 P26368 SF1 Homo sapiens Q15637
Pull Down
12718882
种属内
U2AF2 P26368 SF1 Homo sapiens Q15637
Y2H Fragment Pooling
26420826
种属内
U2AF2 P26368 SF1 Homo sapiens Q15637
Anti Tag CoIP
35271311
种属内
U2AF2 P26368 ATXN1 Homo sapiens P54253
Y2H Array
16713569
种属间: 跨种属相互作用 种属内: 同种属相互作用

U2AF2 抗体

目录号 产品名 应用 反应物种
HY-P82476 U2AF2 Antibody (YA2221) WB, IHC-P, ICC/IF Human, Mouse, Rat

关联疾病

疾病名称 别名
Spinocerebellar Ataxia 1

Spinocerebellar Ataxia Type 1

SCA1

Olivopontocerebellar Atrophy I

Opca1

Opca4

Menzel Type Opca

Schut-Haymaker Type Opca

Spinocerebellar Atrophy I

Opca I

Olivopontocerebellar Atrophy Iv

Opca Iv

Cerebelloparenchymal Disorder I

Cpd1

Olivopontocerebellar Atrophy 1

Cerebelloparenchymal Disorder 1

Olivopontocerebellar Atrophy 4

Spinocerebellar Atrophy 1

Type 1 Spinocerebellar Ataxia

Spinocerebellar Ataxia-1

Ataxia, Spinocerebellar, Type 1

Retinitis Pigmentosa

RP

Rod-Cone Dystrophy

Autosomal Recessive Retinitis Pigmentosa

Non-Syndromic Retinitis Pigmentosa

Pericentral Pigmentary Retinopathy

Pigmentary Retinopathy

Tapetoretinal Degeneration

Rcd

Retinitis Pigmentosa Autosomal Recessive

ARRP

Retinitis Pigmentosa, Autosomal Recessive

Retinitis Pigmentosa 1

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Rattus norvegicus U2AF2 RGD RGD:1310690
Felis catus U2AF2 VGNC VGNC:66741
Canis familiaris U2AF2 VGNC VGNC:48032
Bos taurus U2AF2 VGNC VGNC:36556
Mus musculus U2AF2 MGD MGI:98886
Others U2AF2 NCBI