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  2. TCF12 - transcription factor 12 Gene

TCF12 - transcription factor 12 Gene

中文名称:转录因子 12

种属: Homo sapiens

同用名: HEB; p64; CRS3; HH26; HTF4; TCF-12; bHLHb20; HsT17266

基因 ID: 6938 | 基因类型: protein coding

关于 TCF12

Cytogenetic location: 15q21.3 Genomic coordinates (GRCh38): 15:56,918,090-57,291,310 (from NCBI)

This gene has 28 transcripts (splice variants), 303 orthologues, 2 paralogues and is associated with 81 phenotypes. Ubiquitous expression in brain (RPKM 23.3), endometrium (RPKM 15.8) and 25 other tissues.

功能概要

该基因编码的蛋白质是基本螺旋-环-螺旋 (bHLH) E 蛋白家族的成员,可识别共有结合位点 (E-box) CANNTG。这种编码的蛋白质在许多组织中表达,其中包括骨骼肌、胸腺、B 细胞和 T 细胞,并且可能通过与其他 bHLH E 蛋白形成异二聚体来参与调节谱系特异性基因表达。已经描述了该基因的几种可变剪接的转录本变体,但尚未确定其中一些变体的全长性质。[RefSeq 提供,2008 年 7 月]

The protein encoded by this gene is a member of the basic helix-loop-helix (bHLH) E-protein family that recognizes the consensus binding site (E-box) CANNTG. This encoded protein is expressed in many tissues, among them skeletal muscle, thymus, B- and T-cells, and may participate in regulating lineage-specific gene expression through the formation of heterodimers with other bHLH E-proteins. Several alternatively spliced transcript variants of this gene have been described, but the full-length nature of some of these variants has not been determined. [provided by RefSeq, Jul 2008]

TCF12 基因产物(18)

mRNA Protein Name
NM_001306219.3 NP_001293148.1 transcription factor 12 isoform d
NM_001306220.3 NP_001293149.1 transcription factor 12 isoform e
NM_001322151.2 NP_001309080.1 transcription factor 12 isoform a
NM_001322152.2 NP_001309081.1 transcription factor 12 isoform f
NM_001322154.2 NP_001309083.1 transcription factor 12 isoform g
NM_001322156.2 NP_001309085.1 transcription factor 12 isoform h
NM_001322157.3 NP_001309086.1 transcription factor 12 isoform b
NM_001322158.2 NP_001309087.1 transcription factor 12 isoform i
NM_001322159.3 NP_001309088.1 transcription factor 12 isoform a
NM_001322161.2 NP_001309090.1 transcription factor 12 isoform k
NM_001322162.2 NP_001309091.1 transcription factor 12 isoform a
NM_001322164.2 NP_001309093.1 transcription factor 12 isoform j
NM_001322165.2 NP_001309094.1 transcription factor 12 isoform b
NM_003205.4 NP_003196.1 transcription factor 12 isoform b
NM_207036.2 NP_996919.1 transcription factor 12 isoform a
NM_207037.2 NP_996920.1 transcription factor 12 isoform a
NM_207038.2 NP_996921.1 transcription factor 12 isoform b
NM_207040.2 NP_996923.1 transcription factor 12 isoform c
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables DNA-binding transcription activator activity, RNA polymerase II-specific IDA
IDA: 通过直接分析推断
11802795 GOA
enables DNA-binding transcription factor activity IDA
IDA: 通过直接分析推断
11802795 GOA
enables DNA-binding transcription factor binding IPI
IPI: 通过物理相互作用推断
21828274 GOA
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IDA
IDA: 通过直接分析推断
11802795 GOA
enables SMAD binding IPI
IPI: 通过物理相互作用推断
21828274 GOA
enables bHLH transcription factor binding IPI
IPI: 通过物理相互作用推断
21828274 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
9824680 GOA
enables sequence-specific double-stranded DNA binding IDA
IDA: 通过直接分析推断
28473536 GOA
contributes to transcription cis-regulatory region binding IDA
IDA: 通过直接分析推断
11802795 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in positive regulation of transcription by RNA polymerase II IDA
IDA: 通过直接分析推断
11802795 GOA
involved in response to gonadotropin-releasing hormone IMP
IMP: 通过突变表型推断
32620954 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of RNA polymerase II transcription regulator complex IDA
IDA: 通过直接分析推断
11802795 GOA
located in chromatin IDA
IDA: 通过直接分析推断
21828274 GOA
located in cytoplasm IDA
IDA: 通过直接分析推断
21828274 GOA
located in nucleus IDA
IDA: 通过直接分析推断
21828274 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

TCF12 蛋白结构

HLH

HLH: Helix-loop-helix DNA-binding domain (578 - 631)

  • 0
  • 200
  • 400
  • 600
  • 682 a.a.
蛋白主名 其他名称

transcription factor 12

DNA-binding protein HTF4

TCF12 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra TCF12 Q99081 VPS28 Homo sapiens Q548N1
Validated Y2H
25416956
Intra TCF12 Q99081 ASCL4 Homo sapiens Q6XD76
Y2H Prey Pooling
25416956
Intra TCF12 Q99081 ASCL4 Homo sapiens Q6XD76
Y2H Array
25416956
Intra TCF12 Q99081 MORN4 Homo sapiens Q8WVZ3
Y2H Prey Pooling
25416956
Intra TCF12 Q99081 MORN4 Homo sapiens Q8WVZ3
Validated Y2H
25416956
Intra TCF12 Q99081 LYSMD1 Homo sapiens Q96S90
Validated Y2H
25416956
Intra TCF12 Q99081 LYSMD1 Homo sapiens Q96S90
Y2H Prey Pooling
25416956
Intra TCF12 Q99081 HOPX Homo sapiens Q9BPY8
Y2H Prey Pooling
25416956
Intra TCF12 Q99081 NEUROG3 Homo sapiens Q9Y4Z2
Y2H Array
31515488
Intra TCF12 Q99081 NEUROG3 Homo sapiens Q9Y4Z2
Validated Y2H
25416956
Intra TCF12 Q99081 ARMC8 Homo sapiens Q8IUR7
Y2H Array
25416956
Intra TCF12 Q99081 ARMC8 Homo sapiens Q8IUR7
Validated Y2H
25416956
Intra TCF12 Q99081 ID3 Homo sapiens Q02535
Y2H Array
25416956
Intra TCF12 Q99081 TAL1 Homo sapiens P17542
Y2H
9824680
Intra TCF12 Q99081 TWIST2 Homo sapiens Q8WVJ9
Y2H Prey Pooling
25416956
Intra TCF12 Q99081 TSNAX Homo sapiens Q99598
Y2H Prey Pooling
25416956
Intra TCF12 Q99081 TSNAX Homo sapiens Q99598
Y2H Array
25416956
Intra TCF12 Q99081 TRIM72 Homo sapiens Q6ZMU5
Validated Y2H
25416956
Cross TCF12 Q99081 P0DTD1-PRO_0000449629 SARS-CoV-2 P0DTD1-PRO_0000449629
Y2H Array
36217030
Intra TCF12 Q99081 CRCP Homo sapiens O75575
Y2H Prey Pooling
25416956
Intra TCF12 Q99081 QARS1 Homo sapiens P47897
Y2H Prey Pooling
25416956
Intra TCF12 Q99081 QARS1 Homo sapiens P47897
Y2H Array
25416956
Intra TCF12 Q99081 PSMA1 Homo sapiens P25786
Y2H Prey Pooling
25416956
Intra TCF12 Q99081 PSMA1 Homo sapiens P25786
Validated Y2H
25416956
Intra TCF12 Q99081 PSMA1 Homo sapiens P25786
Y2H Array
25416956
Intra TCF12 Q99081 NAGK Homo sapiens Q9UJ70
Y2H Prey Pooling
25416956
Intra TCF12 Q99081 NAGK Homo sapiens Q9UJ70
Y2H Array
25416956
Intra TCF12 Q99081 HEXIM2 Homo sapiens Q96MH2
Y2H Prey Pooling
25416956
Intra TCF12 Q99081 HEXIM2 Homo sapiens Q96MH2
Validated Y2H
25416956
Intra TCF12 Q99081 CDKN2C Homo sapiens P42773
Y2H Array
31515488
Intra TCF12 Q99081 BMERB1 Homo sapiens Q96MC5
Y2H Array
25416956
Intra TCF12 Q99081 BMERB1 Homo sapiens Q96MC5
Validated Y2H
25416956
Intra TCF12 Q99081 BMERB1 Homo sapiens Q96MC5
Y2H Prey Pooling
25416956
Intra TCF12 Q99081 SPG21 Homo sapiens Q9NZD8
Validated Y2H
25416956
Intra TCF12 Q99081 SPG21 Homo sapiens Q9NZD8
Y2H Array
31515488
Intra TCF12 Q99081 SPG21 Homo sapiens Q9NZD8
Y2H Prey Pooling
25416956
Intra TCF12 Q99081 CFAP206 Homo sapiens Q8IYR0
Validated Y2H
25416956
Intra TCF12 Q99081 STK16 Homo sapiens O75716
Y2H Prey Pooling
25416956
Intra TCF12 Q99081 STK16 Homo sapiens O75716
Y2H Array
25416956
Intra TCF12 Q99081 STAT5A Homo sapiens P42229
Y2H Array
25416956
Intra TCF12 Q99081 STAT5A Homo sapiens P42229
Validated Y2H
25416956
Intra TCF12 Q99081 SRI Homo sapiens P30626
Validated Y2H
25416956
Intra TCF12 Q99081 SRI Homo sapiens P30626
Y2H Prey Pooling
25416956
Intra TCF12 Q99081 OSGIN1 Homo sapiens Q9UJX0
Y2H Array
31515488
Intra TCF12 Q99081 OSGIN1 Homo sapiens Q9UJX0
Validated Y2H
25416956
Intra TCF12 Q99081 OSGIN1 Homo sapiens Q9UJX0
Y2H Array
25416956
Intra TCF12 Q99081 MAPKBP1 Homo sapiens O60336
Validated Y2H
25416956
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Craniosynostosis 3

CRS3

Craniosynostosis, Type 3

Hypogonadotropic Hypogonadism 26 With Or Without Anosmia

HH26

Craniosynostosis

Premature Closure Of Cranial Sutures

Craniostenosis

Craniosynostosis Syndrome

Cso

Craniosynostoses

Congenital Ossification Of Cranial Sutures

Congenital Ossification Of Sutures Of Skull

Craniostosis

Imperfect Fusion Of Skull

Congenital Imperfect Closure Skull

Imperfect Closure Skull

Premature Closure Cranium Sutures

Deficiency Of Craniofacial Axis

Non-Syndromic Bicoronal Craniosynostosis

Isolated Bicoronal Craniosynostosis

Isolated Brachycephaly

Non-Syndromic Bilateral Coronal Suture Synostosis

Chondrosarcoma, Extraskeletal Myxoid

Extraskeletal Myxoid Chondrosarcoma

Emc

Myxoid Extraosseous Chondrosarcoma

Muenke Syndrome

Muenke Nonsyndromic Coronal Craniosynostosis

Fgfr3-Related Craniosynostosis

Fgfr3-Associated Coronal Synostosis

Coronal Craniosynostosis

MNKES

Syndrome Of Coronal Craniosynostosis

MNKS

Fgfr3-Related Isolated Coronal Synostosis

Muenke Non-Syndromic Coronal Craniosynostosis

Saethre-Chotzen Syndrome

SCS

Acs3

Acs Iii

Chotzen Syndrome

Acrocephaly, Skull Asymmetry, And Mild Syndactyly

Acrocephalosyndactyly Type 3

Acrocephalosyndactyly, Type Iii

Acrocephalosyndactyly Type Iii

Saethre-Chotzen Syndrome With Or Without Eyelid Anomalies

Auralcephalosyndactyly

Acs 3

Acrocephalo-Syndactyly, Type 3

Blepharophimosis,Epicanthus Inversus, And Ptosis 3

Aural Cephalosyndactyly

Kurczynski-Casperson Syndrome

Acrocephalosyndactyly Iii

Dysostosis Craniofacialis With Hypertelorism

Saethre-Chotzen Syndrome, With/Without Eyelid Anomalies

Sakati Syndrome

Myasthenic Syndrome, Congenital, 19

Congenital Myasthenic Syndrome 19

CMS19

Myasthenic Syndrome, Congenital, Type 19

Synostosis
Extraosseous Chondrosarcoma

Extraskeletal Myxoid Chondrosarcoma

Tylosis With Esophageal Cancer

Palmoplantar Keratoderma-Esophageal Carcinoma Syndrome

TOC

Keratosis Palmaris Et Plantaris With Esophageal Cancer

Bennion-Patterson Syndrome

Howell-Evans Syndrome

Keratosis Palmoplantaris-Esophageal Carcinoma Syndrome

Palmoplantar Hyperkeratosis-Esophageal Carcinoma Syndrome

Tylosis-Oesophageal Carcinoma Syndrome

Palmoplantar Keratoderma With Esophageal Cancer

Howel-Evans Syndrome

Keratosis Palmoplantaris With Esophageal Cancer

Tylosis - Oesophageal Carcinoma

Howel-Evans' Syndrome

Pitt-Hopkins Syndrome

PTHS

Encephalopathy, Severe Epileptic, With Autonomic Dysfunction

Mental Retardation, Syndromal, With Intermittent Hyperventilation

Intellectual Disability, Wide Mouth, Distinctive Facial Features, And Intermittent Hyperventilation Followed By Apnea

Pitt Hopkins Syndrome

Phs

Encephalopathy Severe Epileptic With Autonomic Dysfunction

Developmental And Epileptic Encephalopathy 54

DEE54

Epileptic Encephalopathy, Early Infantile, 54

Eiee54

Developmental And Epileptic Encephalopathy, 54

Early Infantile Epileptic Encephalopathy 54

Encephalopathy, Epileptic, Early Infantile, Type 54

Exposure Keratitis

Exposure Keratoconjunctivitis

Lagophthalmic Keratitis

Apert Syndrome

Acrocephalosyndactyly Type I

Acs1

Acrocephalosyndactylia

Acrocephalosyndactyly

Acs I

Apert-Crouzon Disease

Acrocephalosyndactyly Type 1

Acrocephalosyndactyly, Type I

Acs 1

Acrocephalo-Syndactyly Type 1

Syndactylic Oxycephaly

Apert'S Syndrome

Type I Acrocephalosyndactyly

APRS

Oligodendroglioma

Oligodendroglial Neoplasm

Oligodendroglial Tumor

Oligodendroglial Tumors

Well Differentiated Oligodendroglioma

Congenital Disorder Of Glycosylation, Type Iim

CDG2M

Congenital Disorder Of Glycosylation Type Iim

Slc35a2-Cdg

Epileptic Encephalopathy, Early Infantile, 22

Cdg-Iim

Cdg Iim

Cdgiim

Developmental And Epileptic Encephalopathy 22

Eiee22

Congenital Disorder Of Glycosylation Type 2m

Cdg Syndrome Type Iim

Dee22

Slc35a2-Congenital Disorder Of Glycosylation

Epileptic Encephalopathy, Early Infantile, 22

Eiee22

Congenital Disorder Of Glycosylation 2m

Congenital Disorder Of Glycosylation X-Linked

Glycosylation, Congenital Disorder Of, Type Iim

Kallmann Syndrome

Hypogonadism With Anosmia

Kallman'S Syndrome

Anosmic Hypogonadism

Anosmic Idiopathic Hypogonadotropic Hypogonadism

Hypogonadotropic Hypogonadism And Anosmia

Hypogonadotropic Hypogonadism-Anosmia Syndrome

Olfacto-Genital Pathological Sequence

Familial Hypogonadism With Anosmia

Kallman Syndrome

Dysplasia Olfactogenitalis Of De Morsier

Kallmann'S Syndrome

Congenital Hypogonadotropic Hypogonadism With Anosmia

Dyslexia
Crouzon Syndrome

Crouzon Craniofacial Dysostosis

Craniofacial Dysostosis

Cfd1

Craniofacial Dysostosis Type 1

Crouzon Disease

Crouzon'S Disease

Craniofacial Dysostosis, Type I

Craniofacial Dysarthrosis

Craniofacial Dysostosis Syndrome

CS

Craniofacial Dysostosis Type I

Vogt Cephalosyndactyly

Craniofrontonasal Syndrome

Craniofrontonasal Dysplasia

CFNS

Cfnd

Craniofrontonasal Dysostosis

Craniofrontonasal Dystosis

Dysplasia, Craniofrontonasal

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Macaca mulatta TCF12 VGNC VGNC:78283
Rattus norvegicus TCF12 RGD RGD:3829
Mus musculus TCF12 MGD MGI:101877
Bos taurus TCF12 VGNC VGNC:35686
Canis familiaris TCF12 VGNC VGNC:47189
Felis catus TCF12 VGNC VGNC:66021