1. Gene
  2. EXOSC8 - exosome component 8 Gene

EXOSC8 - exosome component 8 Gene

中文名称:外泌体组分 8

种属: Homo sapiens

同用名: p9; CIP3; EAP2; OIP2; PCH1C; RRP43; Rrp43p; bA421P11.3

基因 ID: 11340 | 基因类型: protein coding

关于 EXOSC8

Cytogenetic location: 13q13.3 Genomic coordinates (GRCh38): 13:37,000,786-37,009,614 (from NCBI)

This gene has 37 transcripts (splice variants), 212 orthologues, 2 paralogues and is associated with 2 phenotypes. Ubiquitous expression in testis (RPKM 16.7), lymph node (RPKM 12.4) and 25 other tissues.

功能概要

该基因编码 3'-5' 核糖核酸外切酶,该酶特异性地与含有 AU 丰富元素的 mRNA 相互作用。编码的蛋白质是外泌体复合物的一部分,对于许多 RNA 种类的降解很重要。在 6 号染色体上发现了该基因的假基因。[RefSeq 提供,2009 年 3 月]

This gene encodes a 3'-5' exoribonuclease that specifically interacts with mRNAs containing AU-rich elements. The encoded protein is part of the exosome complex that is important for the degradation of numerous RNA species. A pseudogene of this gene is found on chromosome 6. [provided by RefSeq, Mar 2009]

EXOSC8 基因产物(1)

mRNA Protein Name
NM_181503.3 NP_852480.1 exosome complex component RRP43
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
NOT enables RNA exonuclease activity IDA
IDA: 通过直接分析推断
17174896 GOA
enables identical protein binding IPI
IPI: 通过物理相互作用推断
15231747 GOA
enables mRNA 3'-UTR AU-rich region binding IDA
IDA: 通过直接分析推断
16912217 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
12419256 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in RNA catabolic process IDA
IDA: 通过直接分析推断
17174896 GOA
involved in RNA processing IDA
IDA: 通过直接分析推断
17174896 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in cytoplasm IDA
IDA: 通过直接分析推断
17545563 GOA
located in cytosol IDA
IDA: 通过直接分析推断
20531386 GOA
part of exosome (RNase complex) IDA
IDA: 通过直接分析推断
20531389 GOA
located in nucleolus IDA
IDA: 通过直接分析推断
20531386 GOA
located in nucleus IDA
IDA: 通过直接分析推断
17545563 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

EXOSC8 蛋白结构

RNase_PH

RNase_PH: 3' exoribonuclease family, domain 1 (31 - 166)

RNase_PH_C

RNase_PH_C: 3' exoribonuclease family, domain 2 (192 - 255)

  • 0
  • 100
  • 200
  • 276 a.a.
蛋白主名 其他名称

exosome complex component RRP43

CBP-interacting protein 3

EXOSC8 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra EXOSC8 Q96B26 SNRPC Homo sapiens Q5TAL4
Validated Y2H
25416956
Intra EXOSC8 Q96B26 TCEA2 Homo sapiens Q86VL0
Validated Y2H
25416956
Intra EXOSC8 Q96B26 TCEA2 Homo sapiens Q86VL0
Y2H Array
25416956
Intra EXOSC8 Q96B26 MORN4 Homo sapiens Q8WVZ3
Y2H Array
25416956
Intra EXOSC8 Q96B26 MORN4 Homo sapiens Q8WVZ3
Y2H Prey Pooling
25416956
Intra EXOSC8 Q96B26 OTUD4 Homo sapiens Q01804
Y2H Array
25416956
Intra EXOSC8 Q96B26 OTUD4 Homo sapiens Q01804
Y2H Prey Pooling
25416956
Intra EXOSC8 Q96B26 OTUD4 Homo sapiens Q01804
Validated Y2H
25416956
Intra EXOSC8 Q96B26 TXNDC17 Homo sapiens Q9BRA2
Y2H Prey Pooling
25416956
Intra EXOSC8 Q96B26 TXNDC17 Homo sapiens Q9BRA2
Validated Y2H
32296183
Intra EXOSC8 Q96B26 FOXD4L1 Homo sapiens Q9NU39
Validated Y2H
32296183
Intra EXOSC8 Q96B26 ATF2 Homo sapiens P15336
Y2H Prey Pooling
25416956
Intra EXOSC8 Q96B26 HAPLN2 Homo sapiens Q9GZV7
Validated Y2H
32296183
Intra EXOSC8 Q96B26 SPATC1L Homo sapiens Q9H0A9-2
Validated Y2H
32296183
Intra EXOSC8 Q96B26 MACIR Homo sapiens Q96GV9
Validated Y2H
32296183
Intra EXOSC8 Q96B26 TFAP4 Homo sapiens Q01664
Validated Y2H
25416956
Intra EXOSC8 Q96B26 TFAP4 Homo sapiens Q01664
Y2H Prey Pooling
25416956
Intra EXOSC8 Q96B26 FRG1 Homo sapiens Q14331
Validated Y2H
25416956
Intra EXOSC8 Q96B26 FRG1 Homo sapiens Q14331
Y2H Array
25416956
Intra EXOSC8 Q96B26 PIAS2 Homo sapiens O75928-2
Y2H Prey Pooling
32296183
Intra EXOSC8 Q96B26 PIAS2 Homo sapiens O75928-2
Y2H Array
32296183
Intra EXOSC8 Q96B26 EXOSC10 Homo sapiens Q01780
Anti Tag CoIP
21255825
Intra EXOSC8 Q96B26 EXOSC10 Homo sapiens Q01780
Anti Tag CoIP
33961781
Intra EXOSC8 Q96B26 EXOSC3 Homo sapiens Q9NQT5
Anti Tag CoIP
21255825
Intra EXOSC8 Q96B26 EXOSC5 Homo sapiens Q9NQT4
Y2H
15231747
Intra EXOSC8 Q96B26 EXOSC5 Homo sapiens Q9NQT4
Anti Tag CoIP
28514442
Intra EXOSC8 Q96B26 EXOSC5 Homo sapiens Q9NQT4
Y2H Prey Pooling
25416956
Intra EXOSC8 Q96B26 EXOSC5 Homo sapiens Q9NQT4
Y2H
12419256
Intra EXOSC8 Q96B26 EXOSC5 Homo sapiens Q9NQT4
Y2H Prey Pooling
32296183
Intra EXOSC8 Q96B26 EXOSC5 Homo sapiens Q9NQT4
Y2H Array
31515488
Intra EXOSC8 Q96B26 EXOSC5 Homo sapiens Q9NQT4
Validated Y2H
32296183
Intra EXOSC8 Q96B26 EXOSC5 Homo sapiens Q9NQT4
Validated Y2H
25416956
Intra EXOSC8 Q96B26 EXOSC5 Homo sapiens Q9NQT4
Y2H Array
32296183
Intra EXOSC8 Q96B26 EXOSC1 Homo sapiens Q9Y3B2
Validated Y2H
32296183
Intra EXOSC8 Q96B26 LSM4 Homo sapiens Q9Y4Z0
Validated Y2H
32296183
Intra EXOSC8 Q96B26 COL23A1 Homo sapiens Q86Y22
Y2H Array
25416956
Intra EXOSC8 Q96B26 COL23A1 Homo sapiens Q86Y22
Y2H Prey Pooling
25416956
Intra EXOSC8 Q96B26 RUSC1 Homo sapiens Q9BVN2
Y2H Prey Pooling
32296183
Intra EXOSC8 Q96B26 RUSC1 Homo sapiens Q9BVN2
Validated Y2H
32296183
Intra EXOSC8 Q96B26 RUSC1 Homo sapiens Q9BVN2
Y2H Array
32296183
Intra EXOSC8 Q96B26 INCA1 Homo sapiens Q0VD86
Y2H Array
32296183
Intra EXOSC8 Q96B26 INCA1 Homo sapiens Q0VD86
Y2H Prey Pooling
32296183
Intra EXOSC8 Q96B26 FAM90A1 Homo sapiens Q86YD7
Y2H Array
25416956
Intra EXOSC8 Q96B26 FAM90A1 Homo sapiens Q86YD7
Validated Y2H
25416956
Intra EXOSC8 Q96B26 TXNDC9 Homo sapiens O14530
Y2H Array
25416956
Intra EXOSC8 Q96B26 TXNDC9 Homo sapiens O14530
Validated Y2H
25416956
Intra EXOSC8 Q96B26 TCEA2 Homo sapiens Q15560
Y2H Prey Pooling
25416956
Intra EXOSC8 Q96B26 COX5A Homo sapiens P20674
Y2H Array
25416956
Intra EXOSC8 Q96B26 COX5A Homo sapiens P20674
Y2H Prey Pooling
25416956
Intra EXOSC8 Q96B26 FAM161B Homo sapiens Q96MY7
Validated Y2H
32296183
Intra EXOSC8 Q96B26 DUSP23 Homo sapiens Q9BVJ7
Validated Y2H
25416956
Intra EXOSC8 Q96B26 DUSP23 Homo sapiens Q9BVJ7
Validated Y2H
32296183
Intra EXOSC8 Q96B26 DUSP23 Homo sapiens Q9BVJ7
Y2H Array
25416956
Intra EXOSC8 Q96B26 DUSP23 Homo sapiens Q9BVJ7
Y2H Array
32296183
Intra EXOSC8 Q96B26 DUSP23 Homo sapiens Q9BVJ7
Y2H Prey Pooling
25416956
Intra EXOSC8 Q96B26 DUSP23 Homo sapiens Q9BVJ7
Y2H Prey Pooling
32296183
Intra EXOSC8 Q96B26 LNX1 Homo sapiens Q8TBB1
Y2H Prey Pooling
32296183
Intra EXOSC8 Q96B26 LNX1 Homo sapiens Q8TBB1
Y2H Array
32296183
Intra EXOSC8 Q96B26 RASD1 Homo sapiens Q9Y272
Validated Y2H
32296183
Intra EXOSC8 Q96B26 NTAQ1 Homo sapiens Q96HA8
Validated Y2H
32296183
Intra EXOSC8 Q96B26 DDIT4L Homo sapiens Q96D03
Y2H Prey Pooling
32296183
Intra EXOSC8 Q96B26 DDIT4L Homo sapiens Q96D03
Validated Y2H
32296183
Intra EXOSC8 Q96B26 DDIT4L Homo sapiens Q96D03
Y2H Array
32296183
Intra EXOSC8 Q96B26 MYOZ1 Homo sapiens Q9NP98
Validated Y2H
32296183
Intra EXOSC8 Q96B26 PHF21A Homo sapiens Q96BD5
Validated Y2H
32296183
Intra EXOSC8 Q96B26 AEN Homo sapiens Q8WTP8
Y2H Prey Pooling
25416956
Intra EXOSC8 Q96B26 AEN Homo sapiens Q8WTP8
Y2H Array
25416956
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Pontocerebellar Hypoplasia, Type 1c

PCH1C

Hypomyelination With Spinal Muscular Atrophy And Cerebellar Hypoplasia

Pontocerebellar Hypoplasia Type 1c

Pontocerebellar Hypoplasia 1c

Doid:0112334

Hypoplasia, Pontocerebellar, Type 1c

Pontocerebellar Hypoplasia, Type 1e

Pontocerebellar Hypoplasia Type 1

PCH1E

Norman Disease

Pch1

Pontocerebellar Hypoplasia With Anterior Horn Cell Disease

Pontocerebellar Hypoplasia With Infantile Spinal Muscular Atrophy

Pontocerebellar Hypoplasia Type 1e

Pontocerebellar Hypoplasia 1e

Doid:0112322

Doid:0112330

Spastic Ataxia

Spax

Ataxia, Spastic

Pontocerebellar Hypoplasia, Type 1d

PCH1D

Pontocerebellar Hypoplasia Type 1d

Pontocerebellar Hypoplasia 1d

Doid:0112323

Hypoplasia, Pontocerebellar, Type 1d

Pontocerebellar Hypoplasia, Type 1b

Pontocerebellar Hypoplasia Type 1b

PCH1B

Pontocerebellar Hypoplasia 1b

Hypoplasia, Pontocerebellar, Type 1b

Pontocerebellar Hypoplasia

Pch

Congenital Pontocerebellar Hypoplasia

Opch

Hypoplasia, Pontocerebellar

Pontoneocerebellar Hypoplasia

Nonsyndromic Pontocerebellar Hypoplasia

Trichohepatoenteric Syndrome 1

Trichohepatoenteric Syndrome

Syndromic Diarrhea

Tricho-Hepato-Enteric Syndrome

Sd/The

Syndromic Diarrhea/Tricho-Hepato-Enteric Syndrome

THES1

Phenotypic Diarrhea

Thes

Phenotypic Diarrhea Of Infancy

Diarrhea, Syndromic

Diarrhea, Fatal Infantile, With Trichorrhexis Nodosa

Intractable Diarrhea With Phenotypic Anomalies

Syndromatic Diarrhea

Fatal Infantile Diarrhea With Trichorrhexis Nodosa

Hyperoxaluria, Primary, Type Iii

Primary Hyperoxaluria Type 3

HP3

Ph Iii

Primary Hyperoxaluria Type Iii

Hyperoxaluria Primary 3

Hyperoxaluria Non-Hp1/Non-Hp2

Hyperoxaluria Non-Ph I/Ph Ii Form

Hyperoxaluria Primary Type Iii

Gm1-Gangliosidosis, Type I

Gm1 Gangliosidosis Type 1

Beta-Galactosidase-1 Deficiency

Infantile Gm1 Gangliosidosis

GM1G1

Gangliosidosis, Generalized Gm1, Type 1

Glb1 Deficiency

Gangliosidosis Generalized Gm1 Type 1

Gangliosidosis, Generalized Gm1, Type I

Gangliosidosis, Generalized Gm1, Infantile Form

Beta Galactosidase Deficiency Type 1

Glb Deficiency Type 1

Gangliosidosis Generalized Gm1 Infantile Form

Norman-Landing Disease

Gm1-Gangliosidosis 1

Gangliosidosis Generalized Gm1 Infantile Type

Gm1-Gangliosidosis Infantile

Gangliosidosis Gm1 Infantile

Gangliosidosis, Gm1, Type I

Gangliosidosis Gm1

Beta-Galactosidase Deficiency

Hyperoxaluria, Primary, Type Ii

Primary Hyperoxaluria Type 2

D-Glycerate Dehydrogenase Deficiency

Glyoxylate Reductase/Hydroxypyruvate Reductase Deficiency

HP2

Oxalosis Ii

Glyceric Aciduria

L-Glyceric Aciduria

Primary Hyperoxaluria, Type Ii

Oxalosis 2

Hyperoxaluria Primary 2

Hyperoxaluria Primary Type Ii

Ph2

Primary Hyperoxaluria Type Ii

Aortic Valve Prolapse
Muscular Atrophy

Muscle Wasting

Amyotrophia

Wasting - Muscle

Skeletal Muscle Atrophy

Motor Neuron Disease

Anterior Horn Cell Disease

Motor Neuron Diseases

Mnd - [Motor Neurone Disease]

Lou Gehrig Disease

Creeping Palsy

Creeping Paralysis

Bulbar Motor Neuron Disease

Bulbar Syndrome

Anterior Horn Cell Disorder

Hereditary Motor Neuron Disease

Agnathia-Otocephaly Complex

Otocephaly

Holoprosencephaly-Agnathia

Dysgnathia Complex Agnathia-Holoprosencephaly

AGOTC

Agnathia-Holoprosencephaly-Situs Inversus Syndrome

Dysgnathia Complex

Agnathia-Holoprosencephaly

Cervical Auricle

Joubert Syndrome 1

Joubert Syndrome

Jbts

Cerebellooculorenal Syndrome 1

JBTS1

Joubert-Boltshauser Syndrome

Cerebelloparenchymal Disorder Iv

Cpd4

Cors1

Joubert Syndrome And Related Disorders

Jsrd

Familial Aplasia Of The Vermis

Joubert Syndrome Related Disorders

Js

Cerebellar Vermis Agenesis

Cerebelloparenchymal Disorder 4

Agenesis Of Cerebellar Vermis

Cerebello-Oculo-Renal Syndrome

Cors

Joubert-Bolthauser Syndrome

Cpd Iv

Classic Joubert Syndrome

Joubert Syndrome Type A

Pure Joubert Syndrome

Cerebello-Oculo-Renal Syndrome 1

Joubert Syndrome-1

Joubert Syndrome, Type 1

Joubert'S Syndrome

Retinitis Pigmentosa

RP

Rod-Cone Dystrophy

Autosomal Recessive Retinitis Pigmentosa

Non-Syndromic Retinitis Pigmentosa

Pericentral Pigmentary Retinopathy

Pigmentary Retinopathy

Tapetoretinal Degeneration

Rcd

Retinitis Pigmentosa Autosomal Recessive

ARRP

Retinitis Pigmentosa, Autosomal Recessive

Retinitis Pigmentosa 1

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Macaca mulatta EXOSC8 VGNC VGNC:72285
Bos taurus EXOSC8 VGNC VGNC:28662
Mus musculus EXOSC8 MGD MGI:1916889
Canis familiaris EXOSC8 VGNC VGNC:40528
Rattus norvegicus EXOSC8 RGD RGD:1306169
Felis catus EXOSC8 VGNC VGNC:97425
Others EXOSC8 NCBI