1. Gene
  2. HDAC2 - histone deacetylase 2 Gene

HDAC2 - histone deacetylase 2 Gene

中文名称:组蛋白脱乙酰酶 2

种属: Rattus norvegicus

基因 ID: 84577 | 基因类型: protein coding

关于 HDAC2

Primary_assembly 20: 40,548,250-40,571,609 forward strand.mRatBN7.2:CM026993.1

This gene has 2 transcripts (splice variants), 205 orthologues, 12 paralogues and is associated with 42 phenotypes. Biased expression in Muscle (RPKM 329.9), Thymus (RPKM 38.1) and 9 other tissues.

功能概要

该基因编码的蛋白可启动多种功能,包括脱乙酰酶活性;热休克蛋白结合活性;和启动子特异性染色质结合活性。参与多个过程,包括细胞分化的正调节;大分子代谢过程的正向调控;和对生物碱的反应。位于染色质;细胞质;和核。用于研究佩罗尼氏病;酒精使用障碍;和焦虑症。支气管炎的生物标志物;慢性阻塞性肺疾病;子宫内膜异位症;肺气肿;和视觉性癫痫。该基因的人类直系同源物与胃癌有关。与人类 HDAC2(组蛋白脱乙酰酶 2)同源。 [由基因组资源联盟提供,2022 年 4 月]

Enables several functions, including deacetylase activity; heat shock protein binding activity; and promoter-specific chromatin binding activity. Involved in several processes, including positive regulation of cell differentiation; positive regulation of macromolecule metabolic process; and response to alkaloid. Located in chromatin; cytoplasm; and nucleus. Used to study Peyronie's disease; alcohol use disorder; and anxiety disorder. Biomarker of bronchitis; chronic obstructive pulmonary disease; endometriosis; pulmonary emphysema; and visual epilepsy. Human ortholog(s) of this gene implicated in stomach Cancer. Orthologous to human HDAC2 (histone deacetylase 2). [provided by Alliance of Genome Resources, Apr 2022]

HDAC2 基因产物(1)

mRNA Protein Name
NM_053447.1 NP_445899.1 histone deacetylase 2
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables DNA-binding transcription factor binding IPI
IPI: 通过物理相互作用推断
24441681 RGD
enables deacetylase activity IDA
IDA: 通过直接分析推断
23868068 RGD
enables heat shock protein binding IDA
IDA: 通过直接分析推断
18849323 RGD
enables promoter-specific chromatin binding IDA
IDA: 通过直接分析推断
21586557 RGD
enables protein binding IPI
IPI: 通过物理相互作用推断
11516394 RGD
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in behavioral response to ethanol IEP
IEP: 通过表达模式推断
23485013 RGD
involved in cardiac muscle hypertrophy IEP
IEP: 通过表达模式推断
19713680 RGD
involved in cellular response to dopamine IEP
IEP: 通过表达模式推断
15731170 RGD
involved in cellular response to heat IEP
IEP: 通过表达模式推断
18849323 RGD
involved in cellular response to hydrogen peroxide IDA
IDA: 通过直接分析推断
19553350 RGD
involved in cellular response to retinoic acid IEP
IEP: 通过表达模式推断
19486889 RGD
involved in cellular response to transforming growth factor beta stimulus IEP
IEP: 通过表达模式推断
19553350 RGD
involved in negative regulation of DNA-templated transcription IMP
IMP: 通过突变表型推断
11516394 RGD
involved in negative regulation of dendritic spine development IMP
IMP: 通过突变表型推断
23485013 RGD
involved in negative regulation of neuron projection development IMP
IMP: 通过突变表型推断
18754010 RGD
involved in negative regulation of peptidyl-lysine acetylation IMP
IMP: 通过突变表型推断
19486889 RGD
involved in positive regulation of cell population proliferation IMP
IMP: 通过突变表型推断
21465537 RGD
involved in positive regulation of epithelial to mesenchymal transition IMP
IMP: 通过突变表型推断
19553350 RGD
involved in positive regulation of interleukin-1 production IMP
IMP: 通过突变表型推断
22772764 RGD
involved in positive regulation of male mating behavior IMP
IMP: 通过突变表型推断
21586557 RGD
involved in positive regulation of oligodendrocyte differentiation IMP
IMP: 通过突变表型推断
22573687 RGD
involved in positive regulation of protein modification process IMP
IMP: 通过突变表型推断
21465537 RGD
involved in positive regulation of tumor necrosis factor production IMP
IMP: 通过突变表型推断
22772764 RGD
involved in protein modification process IMP
IMP: 通过突变表型推断
24441681 RGD
involved in response to alcohol IEP
IEP: 通过表达模式推断
26509893 RGD
involved in response to amphetamine IEP
IEP: 通过表达模式推断
22470541 RGD
involved in response to amyloid-beta IEP
IEP: 通过表达模式推断
24441681 RGD
involved in response to caffeine IEP
IEP: 通过表达模式推断
24717552 RGD
involved in response to cocaine IEP
IEP: 通过表达模式推断
16670375 RGD
involved in response to hyperoxia IEP
IEP: 通过表达模式推断
21905265 RGD
involved in response to lipopolysaccharide IEP
IEP: 通过表达模式推断
24595367 RGD
involved in response to nicotine IEP
IEP: 通过表达模式推断
24709674 RGD
involved in response to xenobiotic stimulus IEP
IEP: 通过表达模式推断
16670375 RGD
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in chromatin IDA
IDA: 通过直接分析推断
11516394 RGD
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

HDAC2 蛋白结构

HDAC2

HDAC2: cd10011 (8 - 373)

CobT2

CobT2: cl34772 (385 - 478)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 488 a.a.
蛋白主名 其他名称

histone deacetylase 2

直系同源

种属 基因名 来源 基因 ID
Homo sapiens HDAC2 NCBI NCBI:3066