1. Gene
  2. TNF - tumor necrosis factor Gene

TNF - tumor necrosis factor Gene

中文名称:肿瘤坏死因子

种属: Rattus norvegicus

同用名: Tnfa; RATTNF; TNF-alpha

基因 ID: 24835 | 基因类型: protein coding

关于 TNF

Primary_assembly 20: 3,622,011-3,624,629 forward strand.mRatBN7.2:CM026993.1

This gene has 2 transcripts (splice variants), 246 orthologues, 8 paralogues and is associated with 417 phenotypes. Biased expression in Thymus (RPKM 3.7), Spleen (RPKM 26.5) and 9 other tissues.

功能概要

该基因编码的蛋白可启动肿瘤坏死因子受体结合活性。参与多个过程,包括细胞通讯的正向调节;大分子代谢过程的正向调控;和神经元死亡的正调节。位于多个细胞成分中,包括质膜的外侧;细胞外空间;和神经细胞体。用于研究多种疾病,包括脑血管疾病(多发性);肝病(多发性);消化性食管炎;围产期坏死性小肠结肠炎;和脑室周围白质软化。多种疾病的生物标志物,包括脑部疾病(多种);充血性心力衰竭(多发性);炎症性肠病(多发性);肺部疾病(多发);和非酒精性脂肪性肝病(多种)。该基因的人类直系同源物与多种疾病有关,包括动脉疾病(多种);自身免疫性疾病(多种);眼病(多发);肺部疾病(多发);和皮肤病(多种)。与人类 TNF(肿瘤坏死因子)同源。 [由基因组资源联盟提供,2022 年 4 月]

Enables tumor necrosis factor receptor binding activity. Involved in several processes, including positive regulation of cell communication; positive regulation of macromolecule metabolic process; and positive regulation of neuron death. Located in several cellular components, including external side of plasma membrane; extracellular space; and neuronal cell body. Used to study several diseases, including cerebrovascular disease (multiple); liver disease (multiple); peptic esophagitis; perinatal necrotizing enterocolitis; and periventricular leukomalacia. Biomarker of several diseases, including brain disease (multiple); congestive heart failure (multiple); inflammatory bowel disease (multiple); lung disease (multiple); and non-alcoholic fatty liver disease (multiple). Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); autoimmune disease (multiple); eye disease (multiple); lung disease (multiple); and skin disease (multiple). Orthologous to human TNF (tumor necrosis factor). [provided by Alliance of Genome Resources, Apr 2022]

TNF 基因产物(1)

mRNA Protein Name
NM_012675.3 NP_036807.1 tumor necrosis factor
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables tumor necrosis factor receptor binding IDA
IDA: 通过直接分析推断
12376316 RGD
enables tumor necrosis factor receptor binding IPI
IPI: 通过物理相互作用推断
20649583 RGD
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in calcium-mediated signaling IDA
IDA: 通过直接分析推断
12077131 RGD
involved in cell surface receptor signaling pathway via JAK-STAT IDA
IDA: 通过直接分析推断
29702085 RGD
involved in cellular response to amyloid-beta IEP
IEP: 通过表达模式推断
19004508 RGD
involved in cellular response to lipopolysaccharide IEP
IEP: 通过表达模式推断
10959811 RGD
involved in cellular response to lipopolysaccharide IMP
IMP: 通过突变表型推断
17964727 RGD
involved in cellular response to molecule of bacterial origin IEP
IEP: 通过表达模式推断
1580332 RGD
involved in cellular response to retinoic acid IEP
IEP: 通过表达模式推断
15602748 RGD
involved in cellular response to toxic substance IEP
IEP: 通过表达模式推断
9292703 RGD
involved in cellular response to type II interferon IEP
IEP: 通过表达模式推断
16525716 RGD
involved in circadian rhythm IEP
IEP: 通过表达模式推断
9483199 RGD
involved in detection of mechanical stimulus involved in sensory perception of pain IMP
IMP: 通过突变表型推断
16675114 RGD
involved in leukocyte migration involved in inflammatory response IEP
IEP: 通过表达模式推断
27939985 RGD
involved in liver regeneration IEP
IEP: 通过表达模式推断
9178702 RGD
involved in negative regulation of D-glucose import IDA
IDA: 通过直接分析推断
14764603 RGD
involved in negative regulation of L-glutamate import across plasma membrane IDA
IDA: 通过直接分析推断
15713255 RGD
involved in negative regulation of apoptotic process IDA
IDA: 通过直接分析推断
9395232 RGD
involved in negative regulation of bile acid secretion IDA
IDA: 通过直接分析推断
12563244 RGD
involved in negative regulation of cell population proliferation IDA
IDA: 通过直接分析推断
15476580 RGD
involved in negative regulation of fat cell differentiation IDA
IDA: 通过直接分析推断
10757205 RGD
involved in negative regulation of heart rate IMP
IMP: 通过突变表型推断
7875478 RGD
involved in negative regulation of myelination IMP
IMP: 通过突变表型推断
23982745 RGD
involved in negative regulation of oxidative phosphorylation IDA
IDA: 通过直接分析推断
8903396 RGD
involved in negative regulation of systemic arterial blood pressure IMP
IMP: 通过突变表型推断
7875478 RGD
involved in positive regulation of DNA biosynthetic process IDA
IDA: 通过直接分析推断
9395232 RGD
involved in positive regulation of action potential IDA
IDA: 通过直接分析推断
12684490 RGD
involved in positive regulation of apoptotic process IMP
IMP: 通过突变表型推断
16269520 RGD
involved in positive regulation of canonical NF-kappaB signal transduction IDA
IDA: 通过直接分析推断
12729461 RGD
involved in positive regulation of canonical NF-kappaB signal transduction IGI
IGI: 通过遗传相互作用推断
12631113 RGD
involved in positive regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis IMP
IMP: 通过突变表型推断
12131680 RGD
involved in positive regulation of fractalkine production IDA
IDA: 通过直接分析推断
12729461 RGD
involved in positive regulation of gene expression IDA
IDA: 通过直接分析推断
25158758 RGD
involved in positive regulation of gene expression IMP
IMP: 通过突变表型推断
9111198 RGD
involved in positive regulation of hepatocyte proliferation IDA
IDA: 通过直接分析推断
17557910 RGD
involved in positive regulation of hepatocyte proliferation IMP
IMP: 通过突变表型推断
9111198 RGD
involved in positive regulation of interleukin-18 production IMP
IMP: 通过突变表型推断
16269520 RGD
acts upstream of or within positive regulation of interleukin-6 production IDA
IDA: 通过直接分析推断
29702085 RGD
involved in positive regulation of interleukin-6 production IMP
IMP: 通过突变表型推断
10454827 RGD
involved in positive regulation of mitotic nuclear division IMP
IMP: 通过突变表型推断
12713870 RGD
involved in positive regulation of neuron apoptotic process IMP
IMP: 通过突变表型推断
14999074 RGD
involved in positive regulation of neutrophil activation IMP
IMP: 通过突变表型推断
8283134 RGD
involved in positive regulation of nitric-oxide synthase activity IMP
IMP: 通过突变表型推断
9537427 RGD
involved in positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction IMP
IMP: 通过突变表型推断
12729461 RGD
involved in positive regulation of protein localization to plasma membrane IMP
IMP: 通过突变表型推断
11910117 RGD
involved in positive regulation of protein transport IDA
IDA: 通过直接分析推断
12118012 RGD
involved in positive regulation of synaptic transmission IMP
IMP: 通过突变表型推断
11910117 RGD
involved in positive regulation of transcription by RNA polymerase II IDA
IDA: 通过直接分析推断
12729461 RGD
involved in positive regulation of transcription by RNA polymerase II IMP
IMP: 通过突变表型推断
9834372 RGD
involved in regulation of cell population proliferation IDA
IDA: 通过直接分析推断
10757205 RGD
involved in response to 3,3',5-triiodo-L-thyronine IEP
IEP: 通过表达模式推断
15019085 RGD
involved in response to Gram-negative bacterium IEP
IEP: 通过表达模式推断
9466473 RGD
involved in response to L-glutamate IDA
IDA: 通过直接分析推断
15713255 RGD
involved in response to activity IEP
IEP: 通过表达模式推断
20007518 RGD
involved in response to bacterium IEP
IEP: 通过表达模式推断
8769813 RGD
involved in response to ethanol IEP
IEP: 通过表达模式推断
23277536 RGD
involved in response to fructose IEP
IEP: 通过表达模式推断
12364855 RGD
involved in response to gold nanoparticle IEP
IEP: 通过表达模式推断
23150627 RGD
involved in response to hypoxia IEP
IEP: 通过表达模式推断
15197744 RGD
involved in response to isolation stress IEP
IEP: 通过表达模式推断
33411841 RGD
involved in response to lipopolysaccharide IEP
IEP: 通过表达模式推断
11096136 RGD
involved in response to lipopolysaccharide IMP
IMP: 通过突变表型推断
25158758 RGD
involved in response to macrophage colony-stimulating factor IEP
IEP: 通过表达模式推断
24882100 RGD
involved in response to mechanical stimulus IEP
IEP: 通过表达模式推断
11834488 RGD
involved in response to nutrient levels IEP
IEP: 通过表达模式推断
17904344 RGD
involved in response to organic cyclic compound IEP
IEP: 通过表达模式推断
27939985 RGD
involved in response to xenobiotic stimulus IEP
IEP: 通过表达模式推断
19925291 RGD
involved in skeletal muscle contraction IEP
IEP: 通过表达模式推断
20007518 RGD
involved in toll-like receptor 3 signaling pathway IMP
IMP: 通过突变表型推断
25158758 RGD
involved in tumor necrosis factor-mediated signaling pathway IMP
IMP: 通过突变表型推断
12729461 RGD
involved in vasodilation IMP
IMP: 通过突变表型推断
16284227 RGD
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in external side of plasma membrane IDA
IDA: 通过直接分析推断
12622907 RGD
is active in extracellular region IDA
IDA: 通过直接分析推断
25049354 RGD
located in extracellular region IDA
IDA: 通过直接分析推断
12364855 RGD
located in extracellular space IDA
IDA: 通过直接分析推断
16269520 RGD
located in neuronal cell body IDA
IDA: 通过直接分析推断
11412877 RGD
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

TNF 蛋白结构

TNF

TNF: pfam00229 (104 - 234)

  • 0
  • 100
  • 200
  • 235 a.a.
蛋白主名 其他名称

tumor necrosis factor

cachectin

tumor necrosis factor (TNF superfamily, member 2)

tumor necrosis factor ligand superfamily member 2

重组 TNF 蛋白

目录号 产品名 蛋白编号 纯度
HY-P7108 TNF-alpha/TNFSF2 Protein, Rat (P.pastoris) P16599 (L80-L235) ≥95%
HY-P70697 TNF-alpha/TNFSF2 Protein, Rat P16599 (L80-L235) ≥95%

直系同源

种属 基因名 来源 基因 ID
Homo sapiens TNF NCBI NCBI:7124
Canis familiaris TNF NCBI NCBI:403922
Macaca fascicularis TNF NCBI NCBI:102139631
Mus musculus TNF NCBI NCBI:21926
Susscrofa domestica TNF NCBI
Leporidae TNF NCBI
Macaca mulatta TNF NCBI NCBI:715467